Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
VGLL1Q99990 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC11.28□□□□□ -0.6
VGLL1Q99990 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
VGLL1Q99990 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC11.28□□□□□ -0.6
VGLL1Q99990 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
VGLL1Q99990 AL645937.2-201ENST00000396808 931 ntBASIC11.28□□□□□ -0.6
VGLL1Q99990 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC11.28□□□□□ -0.6
VGLL1Q99990 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC11.28□□□□□ -0.6
VGLL1Q99990 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC11.28□□□□□ -0.6
VGLL1Q99990 FAM86LP-201ENST00000478302 853 ntBASIC11.28□□□□□ -0.6
VGLL1Q99990 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC11.28□□□□□ -0.6
VGLL1Q99990 SPDYE18-201ENST00000510091 1050 ntBASIC11.28□□□□□ -0.6
VGLL1Q99990 AC026410.3-201ENST00000514280 936 ntBASIC11.28□□□□□ -0.6
VGLL1Q99990 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC11.28□□□□□ -0.6
VGLL1Q99990 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC11.28□□□□□ -0.6
VGLL1Q99990 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC11.28□□□□□ -0.6
VGLL1Q99990 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC11.28□□□□□ -0.6
VGLL1Q99990 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC11.28□□□□□ -0.6
VGLL1Q99990 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC11.28□□□□□ -0.6
VGLL1Q99990 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC11.28□□□□□ -0.6
VGLL1Q99990 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC11.28□□□□□ -0.6
VGLL1Q99990 AL158211.3-201ENST00000607385 239 ntBASIC11.28□□□□□ -0.6
VGLL1Q99990 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC11.28□□□□□ -0.6
VGLL1Q99990 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
VGLL1Q99990 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC11.28□□□□□ -0.6
VGLL1Q99990 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC11.28□□□□□ -0.6
VGLL1Q99990 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC11.28□□□□□ -0.6
VGLL1Q99990 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
VGLL1Q99990 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
VGLL1Q99990 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC11.28□□□□□ -0.6
VGLL1Q99990 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
VGLL1Q99990 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
VGLL1Q99990 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC11.28□□□□□ -0.6
VGLL1Q99990 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC11.28□□□□□ -0.6
VGLL1Q99990 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
VGLL1Q99990 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
VGLL1Q99990 ADK-205ENST00000539909 1866 ntTSL 2 BASIC11.27□□□□□ -0.6
VGLL1Q99990 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
VGLL1Q99990 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
VGLL1Q99990 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
VGLL1Q99990 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.6
VGLL1Q99990 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC11.27□□□□□ -0.6
VGLL1Q99990 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
VGLL1Q99990 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
VGLL1Q99990 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
VGLL1Q99990 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
VGLL1Q99990 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC11.27□□□□□ -0.6
VGLL1Q99990 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC11.27□□□□□ -0.61
VGLL1Q99990 AC016397.2-201ENST00000624848 1985 ntBASIC11.27□□□□□ -0.61
VGLL1Q99990 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VGLL1Q99990 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VGLL1Q99990 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
VGLL1Q99990 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VGLL1Q99990 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VGLL1Q99990 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VGLL1Q99990 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
VGLL1Q99990 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
VGLL1Q99990 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
VGLL1Q99990 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
VGLL1Q99990 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
VGLL1Q99990 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VGLL1Q99990 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VGLL1Q99990 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VGLL1Q99990 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VGLL1Q99990 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
VGLL1Q99990 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC11.27□□□□□ -0.61
VGLL1Q99990 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC11.27□□□□□ -0.61
VGLL1Q99990 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC11.27□□□□□ -0.61
VGLL1Q99990 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC11.27□□□□□ -0.61
VGLL1Q99990 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC11.27□□□□□ -0.61
VGLL1Q99990 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC11.27□□□□□ -0.61
VGLL1Q99990 AC067863.1-201ENST00000494933 530 ntBASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms