Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC16.56■□□□□ 0.24
PTPN18Q99952 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC16.56■□□□□ 0.24
PTPN18Q99952 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN18Q99952 AC006529.1-201ENST00000459978 637 ntBASIC16.56■□□□□ 0.24
PTPN18Q99952 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC16.56■□□□□ 0.24
PTPN18Q99952 RN7SL375P-201ENST00000492442 298 ntBASIC16.56■□□□□ 0.24
PTPN18Q99952 RN7SL767P-201ENST00000493013 295 ntBASIC16.56■□□□□ 0.24
PTPN18Q99952 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PTPN18Q99952 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PTPN18Q99952 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC16.56■□□□□ 0.24
PTPN18Q99952 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC16.56■□□□□ 0.24
PTPN18Q99952 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN18Q99952 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN18Q99952 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN18Q99952 PCDHA1-201ENST00000378133 2726 ntBASIC16.56■□□□□ 0.24
PTPN18Q99952 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PTPN18Q99952 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN18Q99952 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN18Q99952 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.56■□□□□ 0.24
PTPN18Q99952 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN18Q99952 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.56■□□□□ 0.24
PTPN18Q99952 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN18Q99952 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN18Q99952 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.56■□□□□ 0.24
PTPN18Q99952 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN18Q99952 AC015688.4-201ENST00000580780 1647 ntBASIC16.56■□□□□ 0.24
PTPN18Q99952 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN18Q99952 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN18Q99952 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PTPN18Q99952 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN18Q99952 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PTPN18Q99952 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN18Q99952 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PTPN18Q99952 AL109809.1-201ENST00000418979 1367 ntBASIC16.55■□□□□ 0.24
PTPN18Q99952 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN18Q99952 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN18Q99952 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN18Q99952 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC16.55■□□□□ 0.24
PTPN18Q99952 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PTPN18Q99952 PPP1R2P4-201ENST00000424051 595 ntBASIC16.55■□□□□ 0.24
PTPN18Q99952 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN18Q99952 AL929302.1-201ENST00000426556 871 ntBASIC16.55■□□□□ 0.24
PTPN18Q99952 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC16.55■□□□□ 0.24
PTPN18Q99952 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN18Q99952 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN18Q99952 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC16.55■□□□□ 0.24
PTPN18Q99952 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC16.55■□□□□ 0.24
PTPN18Q99952 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN18Q99952 AC008026.2-201ENST00000495438 348 ntBASIC16.55■□□□□ 0.24
PTPN18Q99952 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPN18Q99952 AC068831.5-201ENST00000557387 328 ntBASIC16.55■□□□□ 0.24
PTPN18Q99952 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PTPN18Q99952 SKA2-205ENST00000580541 689 ntTSL 3 BASIC16.55■□□□□ 0.24
PTPN18Q99952 NAV1-210ENST00000593583 726 ntBASIC16.55■□□□□ 0.24
PTPN18Q99952 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN18Q99952 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC16.55■□□□□ 0.24
PTPN18Q99952 AC021016.3-201ENST00000608367 477 ntBASIC16.55■□□□□ 0.24
PTPN18Q99952 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN18Q99952 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN18Q99952 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN18Q99952 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPN18Q99952 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN18Q99952 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN18Q99952 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN18Q99952 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPN18Q99952 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN18Q99952 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN18Q99952 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN18Q99952 HYMAI-201ENST00000635591 3347 ntBASIC16.55■□□□□ 0.24
PTPN18Q99952 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN18Q99952 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN18Q99952 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN18Q99952 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN18Q99952 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PTPN18Q99952 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PTPN18Q99952 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN18Q99952 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN18Q99952 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PTPN18Q99952 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN18Q99952 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN18Q99952 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN18Q99952 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PTPN18Q99952 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN18Q99952 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PTPN18Q99952 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PTPN18Q99952 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC16.54■□□□□ 0.24
PTPN18Q99952 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.54■□□□□ 0.24
PTPN18Q99952 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
PTPN18Q99952 KLF17P1-201ENST00000547105 1126 ntBASIC16.54■□□□□ 0.24
PTPN18Q99952 SNORD3B-1-201ENST00000577988 758 ntBASIC16.54■□□□□ 0.24
PTPN18Q99952 FTLP5-201ENST00000586853 534 ntBASIC16.54■□□□□ 0.24
PTPN18Q99952 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC16.54■□□□□ 0.24
PTPN18Q99952 AC091769.1-201ENST00000619576 568 ntBASIC16.54■□□□□ 0.24
PTPN18Q99952 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN18Q99952 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN18Q99952 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN18Q99952 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN18Q99952 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN18Q99952 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN18Q99952 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms