Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.25□□□□□ -0.45
GAFA1Q96PS6 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.25□□□□□ -0.45
GAFA1Q96PS6 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 AL354877.1-201ENST00000424412 413 ntBASIC12.25□□□□□ -0.45
GAFA1Q96PS6 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 HSPB1P2-201ENST00000448722 546 ntBASIC12.25□□□□□ -0.45
GAFA1Q96PS6 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 RPSAP36-202ENST00000494591 1261 ntBASIC12.25□□□□□ -0.45
GAFA1Q96PS6 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 AC139749.1-202ENST00000617529 3139 ntBASIC12.25□□□□□ -0.45
GAFA1Q96PS6 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
GAFA1Q96PS6 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 BTBD6P1-201ENST00000412176 1267 ntBASIC12.24□□□□□ -0.45
GAFA1Q96PS6 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
GAFA1Q96PS6 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms