Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 AL645937.2-201ENST00000396808 931 ntBASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 AC073869.1-201ENST00000415574 2762 ntBASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHAMP1Q96JM3 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHAMP1Q96JM3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 AL445209.1-201ENST00000607269 3491 ntBASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 AC068760.1-201ENST00000493579 1953 ntBASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 UGT1A2P-201ENST00000454886 866 ntBASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 FO681548.1-201ENST00000455617 1132 ntBASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 MIR6799-201ENST00000620297 69 ntBASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 AC005252.2-201ENST00000624630 1141 ntBASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 AGAP12P-201ENST00000585227 2359 ntBASIC17.12■□□□□ 0.33
CHAMP1Q96JM3 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms