Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RNF183Q96D59 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.07□□□□□ -0.64
RNF183Q96D59 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RNF183Q96D59 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RNF183Q96D59 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
RNF183Q96D59 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC11.07□□□□□ -0.64
RNF183Q96D59 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
RNF183Q96D59 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RNF183Q96D59 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
RNF183Q96D59 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
RNF183Q96D59 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC11.07□□□□□ -0.64
RNF183Q96D59 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC11.06□□□□□ -0.64
RNF183Q96D59 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 SRC-202ENST00000373558 4304 ntTSL 5 BASIC11.06□□□□□ -0.64
RNF183Q96D59 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC11.06□□□□□ -0.64
RNF183Q96D59 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC11.06□□□□□ -0.64
RNF183Q96D59 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
RNF183Q96D59 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
RNF183Q96D59 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
RNF183Q96D59 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC11.06□□□□□ -0.64
RNF183Q96D59 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
RNF183Q96D59 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 AC090616.6-203ENST00000579186 1945 ntBASIC11.06□□□□□ -0.64
RNF183Q96D59 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC11.06□□□□□ -0.64
RNF183Q96D59 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC11.06□□□□□ -0.64
RNF183Q96D59 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC11.06□□□□□ -0.64
RNF183Q96D59 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
RNF183Q96D59 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
RNF183Q96D59 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC11.06□□□□□ -0.64
RNF183Q96D59 FAM86MP-201ENST00000340703 885 ntBASIC11.06□□□□□ -0.64
RNF183Q96D59 MIR1202-201ENST00000408529 83 ntBASIC11.06□□□□□ -0.64
RNF183Q96D59 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC11.06□□□□□ -0.64
RNF183Q96D59 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC11.06□□□□□ -0.64
RNF183Q96D59 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC11.06□□□□□ -0.64
RNF183Q96D59 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
RNF183Q96D59 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC11.06□□□□□ -0.64
RNF183Q96D59 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
RNF183Q96D59 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
RNF183Q96D59 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC11.06□□□□□ -0.64
RNF183Q96D59 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC11.06□□□□□ -0.64
RNF183Q96D59 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC11.06□□□□□ -0.64
RNF183Q96D59 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC11.06□□□□□ -0.64
RNF183Q96D59 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
RNF183Q96D59 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
RNF183Q96D59 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 POM121L4P-202ENST00000427789 1891 ntBASIC11.06□□□□□ -0.64
RNF183Q96D59 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC11.06□□□□□ -0.64
RNF183Q96D59 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC11.06□□□□□ -0.64
RNF183Q96D59 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
RNF183Q96D59 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RNF183Q96D59 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC11.06□□□□□ -0.64
RNF183Q96D59 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
RNF183Q96D59 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RNF183Q96D59 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RNF183Q96D59 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RNF183Q96D59 C1R-201ENST00000535233 2211 ntTSL 2 BASIC11.05□□□□□ -0.64
RNF183Q96D59 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RNF183Q96D59 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RNF183Q96D59 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RNF183Q96D59 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RNF183Q96D59 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RNF183Q96D59 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RNF183Q96D59 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
RNF183Q96D59 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RNF183Q96D59 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
RNF183Q96D59 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RNF183Q96D59 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
RNF183Q96D59 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC11.05□□□□□ -0.64
RNF183Q96D59 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RNF183Q96D59 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
RNF183Q96D59 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms