Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLX4Q8IY92 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.44■□□□□ 0.38
SLX4Q8IY92 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLX4Q8IY92 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SLX4Q8IY92 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLX4Q8IY92 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC17.43■□□□□ 0.38
SLX4Q8IY92 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLX4Q8IY92 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLX4Q8IY92 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLX4Q8IY92 LINC00554-201ENST00000564841 3011 ntBASIC17.43■□□□□ 0.38
SLX4Q8IY92 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC17.43■□□□□ 0.38
SLX4Q8IY92 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SLX4Q8IY92 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLX4Q8IY92 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC17.43■□□□□ 0.38
SLX4Q8IY92 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC17.43■□□□□ 0.38
SLX4Q8IY92 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC17.43■□□□□ 0.38
SLX4Q8IY92 RN7SKP155-201ENST00000516031 288 ntBASIC17.43■□□□□ 0.38
SLX4Q8IY92 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC17.43■□□□□ 0.38
SLX4Q8IY92 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SLX4Q8IY92 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC17.43■□□□□ 0.38
SLX4Q8IY92 AL009176.1-201ENST00000607876 650 ntBASIC17.43■□□□□ 0.38
SLX4Q8IY92 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC17.43■□□□□ 0.38
SLX4Q8IY92 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLX4Q8IY92 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SLX4Q8IY92 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SLX4Q8IY92 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLX4Q8IY92 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLX4Q8IY92 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC17.43■□□□□ 0.38
SLX4Q8IY92 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SLX4Q8IY92 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
SLX4Q8IY92 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SLX4Q8IY92 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLX4Q8IY92 SARS-202ENST00000369923 1882 ntTSL 5 BASIC17.43■□□□□ 0.38
SLX4Q8IY92 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
SLX4Q8IY92 AC064801.2-201ENST00000625052 1303 ntBASIC17.43■□□□□ 0.38
SLX4Q8IY92 AC008894.3-201ENST00000624324 3103 ntBASIC17.42■□□□□ 0.38
SLX4Q8IY92 AC018442.1-201ENST00000421439 2061 ntBASIC17.42■□□□□ 0.38
SLX4Q8IY92 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLX4Q8IY92 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SLX4Q8IY92 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC17.42■□□□□ 0.38
SLX4Q8IY92 AC073210.1-201ENST00000414799 232 ntBASIC17.42■□□□□ 0.38
SLX4Q8IY92 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLX4Q8IY92 AL080243.1-201ENST00000423293 1060 ntBASIC17.42■□□□□ 0.38
SLX4Q8IY92 AC092573.1-201ENST00000433054 884 ntBASIC17.42■□□□□ 0.38
SLX4Q8IY92 AC092896.1-201ENST00000465850 380 ntBASIC17.42■□□□□ 0.38
SLX4Q8IY92 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC17.42■□□□□ 0.38
SLX4Q8IY92 SLC25A15P3-201ENST00000505530 290 ntBASIC17.42■□□□□ 0.38
SLX4Q8IY92 AC087203.1-201ENST00000532111 1181 ntBASIC17.42■□□□□ 0.38
SLX4Q8IY92 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC17.42■□□□□ 0.38
SLX4Q8IY92 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC17.42■□□□□ 0.38
SLX4Q8IY92 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC17.42■□□□□ 0.38
SLX4Q8IY92 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC17.42■□□□□ 0.38
SLX4Q8IY92 AC090510.3-201ENST00000615831 821 ntBASIC17.42■□□□□ 0.38
SLX4Q8IY92 ESR1-214ENST00000638569 132 ntTSL 5 BASIC17.42■□□□□ 0.38
SLX4Q8IY92 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.42■□□□□ 0.38
SLX4Q8IY92 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SLX4Q8IY92 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLX4Q8IY92 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLX4Q8IY92 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLX4Q8IY92 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.42■□□□□ 0.38
SLX4Q8IY92 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLX4Q8IY92 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLX4Q8IY92 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLX4Q8IY92 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLX4Q8IY92 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.42■□□□□ 0.38
SLX4Q8IY92 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLX4Q8IY92 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLX4Q8IY92 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLX4Q8IY92 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.42■□□□□ 0.38
SLX4Q8IY92 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLX4Q8IY92 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLX4Q8IY92 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SLX4Q8IY92 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SLX4Q8IY92 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SLX4Q8IY92 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SLX4Q8IY92 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLX4Q8IY92 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC17.42■□□□□ 0.38
SLX4Q8IY92 KNOP1P1-201ENST00000542108 989 ntBASIC17.42■□□□□ 0.38
SLX4Q8IY92 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SLX4Q8IY92 AC005274.1-201ENST00000623460 802 ntBASIC17.42■□□□□ 0.38
SLX4Q8IY92 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
SLX4Q8IY92 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLX4Q8IY92 AC138761.6-201ENST00000583997 1423 ntBASIC17.42■□□□□ 0.38
SLX4Q8IY92 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLX4Q8IY92 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLX4Q8IY92 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SLX4Q8IY92 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.41■□□□□ 0.38
SLX4Q8IY92 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.41■□□□□ 0.38
SLX4Q8IY92 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLX4Q8IY92 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.41■□□□□ 0.38
SLX4Q8IY92 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLX4Q8IY92 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLX4Q8IY92 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC17.41■□□□□ 0.38
SLX4Q8IY92 IFNWP2-201ENST00000431203 580 ntBASIC17.41■□□□□ 0.38
SLX4Q8IY92 AC092903.1-201ENST00000466506 262 ntBASIC17.41■□□□□ 0.38
SLX4Q8IY92 RPS18P9-201ENST00000482817 460 ntBASIC17.41■□□□□ 0.38
SLX4Q8IY92 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC17.41■□□□□ 0.38
SLX4Q8IY92 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC17.41■□□□□ 0.38
SLX4Q8IY92 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.41■□□□□ 0.38
SLX4Q8IY92 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms