Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 AC106760.1-201ENST00000508690 800 ntBASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 TDH-203ENST00000531764 1110 ntBASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 AC010319.3-201ENST00000597028 470 ntBASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 ENPP7P14-201ENST00000621765 1040 ntBASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC83Q8IWF9 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 AC068587.3-201ENST00000526613 355 ntBASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 AC103988.2-201ENST00000561804 725 ntBASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 AP001002.3-201ENST00000623482 206 ntBASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 HSPA8P5-201ENST00000456928 2069 ntBASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CCDC83Q8IWF9 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms