Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 CHCHD2P2-201ENST00000503744 321 ntBASIC18.11■□□□□ 0.49
COL23A1Q86Y22 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 SKA2-205ENST00000580541 689 ntTSL 3 BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC18.11■□□□□ 0.49
COL23A1Q86Y22 AC011462.4-201ENST00000616866 449 ntBASIC18.11■□□□□ 0.49
COL23A1Q86Y22 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 OR6D1P-203ENST00000641209 4860 ntBASIC18.11■□□□□ 0.49
COL23A1Q86Y22 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 PKD1P1-201ENST00000458669 6805 ntBASIC18.11■□□□□ 0.49
COL23A1Q86Y22 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 AC011270.2-201ENST00000624293 2550 ntBASIC18.1■□□□□ 0.49
COL23A1Q86Y22 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 AC112693.3-201ENST00000624819 1983 ntBASIC18.1■□□□□ 0.49
COL23A1Q86Y22 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 GEMIN8P4-201ENST00000380526 729 ntBASIC18.1■□□□□ 0.49
COL23A1Q86Y22 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 AL080243.1-201ENST00000423293 1060 ntBASIC18.1■□□□□ 0.49
COL23A1Q86Y22 AL512599.1-201ENST00000430724 685 ntBASIC18.1■□□□□ 0.49
COL23A1Q86Y22 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 GALP-202ENST00000440823 889 ntTSL 5 BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 RN7SL788P-201ENST00000460504 316 ntBASIC18.1■□□□□ 0.49
COL23A1Q86Y22 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 BCRP4-201ENST00000506079 804 ntBASIC18.1■□□□□ 0.49
COL23A1Q86Y22 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 F11R-204ENST00000537746 1245 ntTSL 2 BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 AL359091.4-201ENST00000610052 409 ntBASIC18.1■□□□□ 0.49
COL23A1Q86Y22 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC18.1■□□□□ 0.49
COL23A1Q86Y22 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms