Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 PDIA3P2-201ENST00000428073 158 ntBASIC16.43■□□□□ 0.22
TRIM50Q86XT4 AC073150.1-201ENST00000450406 1084 ntBASIC16.43■□□□□ 0.22
TRIM50Q86XT4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.43■□□□□ 0.22
TRIM50Q86XT4 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 MIR3907-201ENST00000579424 151 ntBASIC16.43■□□□□ 0.22
TRIM50Q86XT4 AC020922.3-201ENST00000595064 547 ntBASIC16.43■□□□□ 0.22
TRIM50Q86XT4 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 AL157813.1-201ENST00000612996 587 ntBASIC16.43■□□□□ 0.22
TRIM50Q86XT4 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 NAP1L6-202ENST00000641404 1222 ntBASIC16.43■□□□□ 0.22
TRIM50Q86XT4 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 TMBIM7P-202ENST00000641474 1516 ntBASIC16.43■□□□□ 0.22
TRIM50Q86XT4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 C8orf49-201ENST00000525043 1968 ntBASIC16.42■□□□□ 0.22
TRIM50Q86XT4 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.42■□□□□ 0.22
TRIM50Q86XT4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 MRPL37P1-201ENST00000592451 1337 ntBASIC16.42■□□□□ 0.22
TRIM50Q86XT4 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM50Q86XT4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 AC092135.3-201ENST00000624151 1846 ntBASIC16.41■□□□□ 0.22
TRIM50Q86XT4 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 AL035414.1-201ENST00000451327 857 ntBASIC16.41■□□□□ 0.22
TRIM50Q86XT4 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 TCAF2P1-201ENST00000291129 2421 ntBASIC16.41■□□□□ 0.22
TRIM50Q86XT4 AC006504.5-208ENST00000588784 2401 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms