Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DDR1Q08345 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDR1Q08345 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC17.98■□□□□ 0.47
DDR1Q08345 AC063952.3-201ENST00000467756 308 ntBASIC17.98■□□□□ 0.47
DDR1Q08345 AC026470.1-201ENST00000478038 846 ntBASIC17.98■□□□□ 0.47
DDR1Q08345 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC17.98■□□□□ 0.47
DDR1Q08345 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC17.98■□□□□ 0.47
DDR1Q08345 HINT1-205ENST00000508488 703 ntTSL 2 BASIC17.98■□□□□ 0.47
DDR1Q08345 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC17.98■□□□□ 0.47
DDR1Q08345 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC17.98■□□□□ 0.47
DDR1Q08345 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC17.98■□□□□ 0.47
DDR1Q08345 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC17.98■□□□□ 0.47
DDR1Q08345 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
DDR1Q08345 RPS5-204ENST00000598098 536 ntTSL 2 BASIC17.98■□□□□ 0.47
DDR1Q08345 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDR1Q08345 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDR1Q08345 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DDR1Q08345 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDR1Q08345 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC17.98■□□□□ 0.47
DDR1Q08345 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDR1Q08345 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DDR1Q08345 AL136379.1-201ENST00000623471 2642 ntBASIC17.98■□□□□ 0.47
DDR1Q08345 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.98■□□□□ 0.47
DDR1Q08345 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.98■□□□□ 0.47
DDR1Q08345 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDR1Q08345 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDR1Q08345 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DDR1Q08345 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
DDR1Q08345 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DDR1Q08345 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.97■□□□□ 0.47
DDR1Q08345 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDR1Q08345 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
DDR1Q08345 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
DDR1Q08345 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
DDR1Q08345 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
DDR1Q08345 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDR1Q08345 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.97■□□□□ 0.47
DDR1Q08345 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDR1Q08345 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC17.97■□□□□ 0.47
DDR1Q08345 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDR1Q08345 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
DDR1Q08345 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDR1Q08345 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DDR1Q08345 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
DDR1Q08345 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC17.97■□□□□ 0.47
DDR1Q08345 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC17.97■□□□□ 0.47
DDR1Q08345 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC17.97■□□□□ 0.47
DDR1Q08345 CISD2-202ENST00000503643 808 ntTSL 2 BASIC17.97■□□□□ 0.47
DDR1Q08345 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC17.97■□□□□ 0.47
DDR1Q08345 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DDR1Q08345 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DDR1Q08345 KRT8P2-201ENST00000556193 944 ntBASIC17.97■□□□□ 0.47
DDR1Q08345 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC17.97■□□□□ 0.47
DDR1Q08345 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DDR1Q08345 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC17.97■□□□□ 0.47
DDR1Q08345 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DDR1Q08345 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDR1Q08345 AC008972.2-201ENST00000606587 494 ntBASIC17.97■□□□□ 0.47
DDR1Q08345 AL021707.6-201ENST00000609212 491 ntBASIC17.97■□□□□ 0.47
DDR1Q08345 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DDR1Q08345 AL627230.2-201ENST00000613254 655 ntBASIC17.97■□□□□ 0.47
DDR1Q08345 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
DDR1Q08345 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.97■□□□□ 0.47
DDR1Q08345 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DDR1Q08345 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDR1Q08345 AC015688.4-201ENST00000580780 1647 ntBASIC17.97■□□□□ 0.47
DDR1Q08345 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDR1Q08345 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDR1Q08345 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.97■□□□□ 0.47
DDR1Q08345 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDR1Q08345 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DDR1Q08345 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDR1Q08345 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDR1Q08345 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.96■□□□□ 0.47
DDR1Q08345 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DDR1Q08345 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DDR1Q08345 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DDR1Q08345 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
DDR1Q08345 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
DDR1Q08345 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DDR1Q08345 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DDR1Q08345 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.96■□□□□ 0.47
DDR1Q08345 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DDR1Q08345 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
DDR1Q08345 BAX-205ENST00000391871 687 ntTSL 5 BASIC17.96■□□□□ 0.47
DDR1Q08345 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DDR1Q08345 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DDR1Q08345 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC17.96■□□□□ 0.47
DDR1Q08345 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC17.96■□□□□ 0.47
DDR1Q08345 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.96■□□□□ 0.47
DDR1Q08345 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC17.96■□□□□ 0.47
DDR1Q08345 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC17.96■□□□□ 0.47
DDR1Q08345 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC17.96■□□□□ 0.47
DDR1Q08345 AC013553.1-201ENST00000560906 267 ntBASIC17.96■□□□□ 0.47
DDR1Q08345 MBP-238ENST00000580402 915 ntTSL 5 BASIC17.96■□□□□ 0.47
DDR1Q08345 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
DDR1Q08345 MME-218ENST00000625667 363 ntTSL 5 BASIC17.96■□□□□ 0.47
DDR1Q08345 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC17.96■□□□□ 0.47
DDR1Q08345 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
DDR1Q08345 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms