Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
LTBQ06643 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LTBQ06643 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
LTBQ06643 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.54□□□□□ -0.24
LTBQ06643 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.54□□□□□ -0.24
LTBQ06643 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.54□□□□□ -0.24
LTBQ06643 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LTBQ06643 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
LTBQ06643 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.54□□□□□ -0.24
LTBQ06643 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.54□□□□□ -0.24
LTBQ06643 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.54□□□□□ -0.24
LTBQ06643 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.54□□□□□ -0.24
LTBQ06643 KLF2P4-201ENST00000451959 1225 ntBASIC13.54□□□□□ -0.24
LTBQ06643 CTBP2P5-201ENST00000454986 1264 ntBASIC13.54□□□□□ -0.24
LTBQ06643 PFN1P12-201ENST00000455938 534 ntBASIC13.54□□□□□ -0.24
LTBQ06643 AC108725.1-201ENST00000495472 409 ntBASIC13.54□□□□□ -0.24
LTBQ06643 RNA5SP423-201ENST00000517127 109 ntBASIC13.54□□□□□ -0.24
LTBQ06643 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.54□□□□□ -0.24
LTBQ06643 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.54□□□□□ -0.24
LTBQ06643 BTNL10-201ENST00000595971 695 ntBASIC13.54□□□□□ -0.24
LTBQ06643 AC243960.2-201ENST00000600996 747 ntBASIC13.54□□□□□ -0.24
LTBQ06643 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.54□□□□□ -0.24
LTBQ06643 AL603764.1-201ENST00000636452 321 ntBASIC13.54□□□□□ -0.24
LTBQ06643 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.54□□□□□ -0.24
LTBQ06643 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LTBQ06643 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.54□□□□□ -0.24
LTBQ06643 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
LTBQ06643 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LTBQ06643 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LTBQ06643 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LTBQ06643 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LTBQ06643 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LTBQ06643 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.53□□□□□ -0.24
LTBQ06643 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LTBQ06643 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.53□□□□□ -0.24
LTBQ06643 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LTBQ06643 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LTBQ06643 AC041040.2-201ENST00000622926 2899 ntBASIC13.53□□□□□ -0.24
LTBQ06643 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LTBQ06643 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LTBQ06643 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LTBQ06643 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.53□□□□□ -0.24
LTBQ06643 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.53□□□□□ -0.24
LTBQ06643 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.53□□□□□ -0.24
LTBQ06643 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.53□□□□□ -0.24
LTBQ06643 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.53□□□□□ -0.24
LTBQ06643 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LTBQ06643 FO681548.1-201ENST00000455617 1132 ntBASIC13.53□□□□□ -0.24
LTBQ06643 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.53□□□□□ -0.24
LTBQ06643 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.53□□□□□ -0.24
LTBQ06643 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.53□□□□□ -0.24
LTBQ06643 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LTBQ06643 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.53□□□□□ -0.24
LTBQ06643 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LTBQ06643 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LTBQ06643 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LTBQ06643 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.53□□□□□ -0.24
LTBQ06643 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.53□□□□□ -0.24
LTBQ06643 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LTBQ06643 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LTBQ06643 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LTBQ06643 AC015802.1-201ENST00000588104 1449 ntBASIC13.53□□□□□ -0.24
LTBQ06643 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LTBQ06643 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LTBQ06643 AC003102.2-201ENST00000589195 1469 ntBASIC13.53□□□□□ -0.24
LTBQ06643 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LTBQ06643 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.53□□□□□ -0.24
LTBQ06643 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LTBQ06643 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.53□□□□□ -0.24
LTBQ06643 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LTBQ06643 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms