Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.24□□□□□ -0.29
CLRN1P58418 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLRN1P58418 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CLRN1P58418 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLRN1P58418 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLRN1P58418 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLRN1P58418 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLRN1P58418 SNX18-202ENST00000343017 3140 ntBASIC13.24□□□□□ -0.29
CLRN1P58418 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLRN1P58418 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLRN1P58418 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLRN1P58418 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.24□□□□□ -0.29
CLRN1P58418 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLRN1P58418 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLRN1P58418 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CLRN1P58418 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.24□□□□□ -0.29
CLRN1P58418 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
CLRN1P58418 AC015802.1-201ENST00000588104 1449 ntBASIC13.24□□□□□ -0.29
CLRN1P58418 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.24□□□□□ -0.29
CLRN1P58418 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.24□□□□□ -0.29
CLRN1P58418 MRPL37P1-201ENST00000592451 1337 ntBASIC13.24□□□□□ -0.29
CLRN1P58418 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLRN1P58418 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.24□□□□□ -0.29
CLRN1P58418 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLRN1P58418 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.24□□□□□ -0.29
CLRN1P58418 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.24□□□□□ -0.29
CLRN1P58418 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLRN1P58418 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.24□□□□□ -0.29
CLRN1P58418 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.24□□□□□ -0.29
CLRN1P58418 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.24□□□□□ -0.29
CLRN1P58418 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.24□□□□□ -0.29
CLRN1P58418 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
CLRN1P58418 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.24□□□□□ -0.29
CLRN1P58418 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLRN1P58418 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CLRN1P58418 KRT17P7-201ENST00000451704 1104 ntBASIC13.24□□□□□ -0.29
CLRN1P58418 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLRN1P58418 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLRN1P58418 AC008735.3-201ENST00000596646 500 ntBASIC13.24□□□□□ -0.29
CLRN1P58418 AC233724.13-201ENST00000598383 410 ntBASIC13.24□□□□□ -0.29
CLRN1P58418 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.24□□□□□ -0.29
CLRN1P58418 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CLRN1P58418 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLRN1P58418 AC132938.4-201ENST00000623835 848 ntBASIC13.24□□□□□ -0.29
CLRN1P58418 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.24□□□□□ -0.29
CLRN1P58418 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLRN1P58418 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLRN1P58418 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLRN1P58418 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CLRN1P58418 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLRN1P58418 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CLRN1P58418 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLRN1P58418 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLRN1P58418 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLRN1P58418 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.24□□□□□ -0.29
CLRN1P58418 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLRN1P58418 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CLRN1P58418 AC011840.2-201ENST00000563063 1520 ntBASIC13.23□□□□□ -0.29
CLRN1P58418 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLRN1P58418 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLRN1P58418 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLRN1P58418 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.23□□□□□ -0.29
CLRN1P58418 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CLRN1P58418 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.23□□□□□ -0.29
CLRN1P58418 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLRN1P58418 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLRN1P58418 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.23□□□□□ -0.29
CLRN1P58418 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CLRN1P58418 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CLRN1P58418 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLRN1P58418 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLRN1P58418 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLRN1P58418 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLRN1P58418 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLRN1P58418 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CLRN1P58418 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLRN1P58418 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLRN1P58418 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLRN1P58418 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLRN1P58418 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLRN1P58418 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLRN1P58418 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.23□□□□□ -0.29
CLRN1P58418 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.23□□□□□ -0.29
CLRN1P58418 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.23□□□□□ -0.29
CLRN1P58418 AC131206.1-201ENST00000538078 1211 ntBASIC13.23□□□□□ -0.29
CLRN1P58418 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.23□□□□□ -0.29
CLRN1P58418 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.23□□□□□ -0.29
CLRN1P58418 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.23□□□□□ -0.29
CLRN1P58418 AC025279.2-201ENST00000569730 653 ntBASIC13.23□□□□□ -0.29
CLRN1P58418 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.23□□□□□ -0.29
CLRN1P58418 ECM1P1-201ENST00000604092 1279 ntBASIC13.23□□□□□ -0.29
CLRN1P58418 AC138696.2-201ENST00000607376 223 ntBASIC13.23□□□□□ -0.29
CLRN1P58418 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.23□□□□□ -0.29
CLRN1P58418 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.23□□□□□ -0.29
CLRN1P58418 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.23□□□□□ -0.29
CLRN1P58418 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLRN1P58418 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLRN1P58418 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.23□□□□□ -0.29
CLRN1P58418 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLRN1P58418 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms