Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.18□□□□□ -0.14
VSX2P58304 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.18□□□□□ -0.14
VSX2P58304 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
VSX2P58304 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VSX2P58304 GCOM2-201ENST00000509133 1104 ntBASIC14.18□□□□□ -0.14
VSX2P58304 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.18□□□□□ -0.14
VSX2P58304 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.18□□□□□ -0.14
VSX2P58304 AC131206.1-201ENST00000538078 1211 ntBASIC14.18□□□□□ -0.14
VSX2P58304 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.18□□□□□ -0.14
VSX2P58304 AC104982.3-201ENST00000581995 514 ntBASIC14.18□□□□□ -0.14
VSX2P58304 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.18□□□□□ -0.14
VSX2P58304 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VSX2P58304 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.18□□□□□ -0.14
VSX2P58304 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.18□□□□□ -0.14
VSX2P58304 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSX2P58304 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSX2P58304 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
VSX2P58304 AL136172.1-201ENST00000598590 1394 ntBASIC14.18□□□□□ -0.14
VSX2P58304 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
VSX2P58304 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
VSX2P58304 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
VSX2P58304 FGD5P1-202ENST00000614866 2498 ntBASIC14.18□□□□□ -0.14
VSX2P58304 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
VSX2P58304 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.18□□□□□ -0.14
VSX2P58304 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSX2P58304 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.18□□□□□ -0.14
VSX2P58304 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSX2P58304 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VSX2P58304 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSX2P58304 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VSX2P58304 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.17□□□□□ -0.14
VSX2P58304 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VSX2P58304 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VSX2P58304 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VSX2P58304 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VSX2P58304 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VSX2P58304 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VSX2P58304 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VSX2P58304 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.17□□□□□ -0.14
VSX2P58304 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VSX2P58304 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VSX2P58304 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VSX2P58304 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VSX2P58304 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.17□□□□□ -0.14
VSX2P58304 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VSX2P58304 HSPB1P2-201ENST00000448722 546 ntBASIC14.17□□□□□ -0.14
VSX2P58304 AL591846.1-201ENST00000451736 433 ntBASIC14.17□□□□□ -0.14
VSX2P58304 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.17□□□□□ -0.14
VSX2P58304 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.17□□□□□ -0.14
VSX2P58304 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.17□□□□□ -0.14
VSX2P58304 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.17□□□□□ -0.14
VSX2P58304 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
VSX2P58304 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VSX2P58304 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.17□□□□□ -0.14
VSX2P58304 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VSX2P58304 AC005695.3-201ENST00000614522 232 ntBASIC14.17□□□□□ -0.14
VSX2P58304 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VSX2P58304 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
VSX2P58304 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VSX2P58304 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.17□□□□□ -0.14
VSX2P58304 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VSX2P58304 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VSX2P58304 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VSX2P58304 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VSX2P58304 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
VSX2P58304 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
VSX2P58304 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VSX2P58304 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VSX2P58304 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.16□□□□□ -0.14
VSX2P58304 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
VSX2P58304 AC013726.1-201ENST00000563747 2285 ntBASIC14.16□□□□□ -0.14
VSX2P58304 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.16□□□□□ -0.14
VSX2P58304 SHC1P1-201ENST00000425230 1745 ntBASIC14.16□□□□□ -0.14
VSX2P58304 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VSX2P58304 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VSX2P58304 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.16□□□□□ -0.14
VSX2P58304 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VSX2P58304 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.16□□□□□ -0.14
VSX2P58304 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
VSX2P58304 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.16□□□□□ -0.14
VSX2P58304 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.16□□□□□ -0.14
VSX2P58304 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.16□□□□□ -0.14
VSX2P58304 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VSX2P58304 AC104306.2-201ENST00000451877 341 ntBASIC14.16□□□□□ -0.14
VSX2P58304 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.16□□□□□ -0.14
VSX2P58304 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.16□□□□□ -0.14
VSX2P58304 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VSX2P58304 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.16□□□□□ -0.14
VSX2P58304 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.16□□□□□ -0.14
VSX2P58304 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.16□□□□□ -0.14
VSX2P58304 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.16□□□□□ -0.14
VSX2P58304 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.16□□□□□ -0.14
VSX2P58304 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.16□□□□□ -0.14
VSX2P58304 AL118558.3-201ENST00000607414 1079 ntBASIC14.16□□□□□ -0.14
VSX2P58304 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VSX2P58304 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
VSX2P58304 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VSX2P58304 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VSX2P58304 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VSX2P58304 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms