Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC19.24■□□□□ 0.67
RIPK4P57078 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC19.24■□□□□ 0.67
RIPK4P57078 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC19.24■□□□□ 0.67
RIPK4P57078 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC19.24■□□□□ 0.67
RIPK4P57078 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK4P57078 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK4P57078 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC19.24■□□□□ 0.67
RIPK4P57078 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC19.24■□□□□ 0.67
RIPK4P57078 CSH2-202ENST00000345366 598 ntTSL 5 BASIC19.24■□□□□ 0.67
RIPK4P57078 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RIPK4P57078 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK4P57078 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK4P57078 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC19.24■□□□□ 0.67
RIPK4P57078 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC19.24■□□□□ 0.67
RIPK4P57078 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC19.24■□□□□ 0.67
RIPK4P57078 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC19.24■□□□□ 0.67
RIPK4P57078 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC19.24■□□□□ 0.67
RIPK4P57078 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC19.24■□□□□ 0.67
RIPK4P57078 CSH2-206ENST00000560142 749 ntTSL 5 BASIC19.24■□□□□ 0.67
RIPK4P57078 SNORD3B-2-202ENST00000571722 791 ntBASIC19.24■□□□□ 0.67
RIPK4P57078 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC19.24■□□□□ 0.67
RIPK4P57078 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK4P57078 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RIPK4P57078 AC232323.1-201ENST00000540724 2099 ntBASIC19.24■□□□□ 0.67
RIPK4P57078 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK4P57078 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RIPK4P57078 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK4P57078 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC19.24■□□□□ 0.67
RIPK4P57078 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK4P57078 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK4P57078 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC19.23■□□□□ 0.67
RIPK4P57078 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIPK4P57078 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIPK4P57078 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIPK4P57078 MVK-214ENST00000629016 1591 ntTSL 5 BASIC19.23■□□□□ 0.67
RIPK4P57078 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIPK4P57078 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC19.23■□□□□ 0.67
RIPK4P57078 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIPK4P57078 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RIPK4P57078 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIPK4P57078 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RIPK4P57078 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIPK4P57078 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC19.23■□□□□ 0.67
RIPK4P57078 AC015656.1-201ENST00000624209 3578 ntBASIC19.23■□□□□ 0.67
RIPK4P57078 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIPK4P57078 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC19.23■□□□□ 0.67
RIPK4P57078 AC016700.1-201ENST00000429424 312 ntBASIC19.23■□□□□ 0.67
RIPK4P57078 FNTAP2-201ENST00000430308 634 ntBASIC19.23■□□□□ 0.67
RIPK4P57078 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC19.23■□□□□ 0.67
RIPK4P57078 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIPK4P57078 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RIPK4P57078 TPT1P11-201ENST00000458482 498 ntBASIC19.23■□□□□ 0.67
RIPK4P57078 AKR7A2P1-201ENST00000460134 915 ntBASIC19.23■□□□□ 0.67
RIPK4P57078 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC19.23■□□□□ 0.67
RIPK4P57078 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC19.23■□□□□ 0.67
RIPK4P57078 NOP2-211ENST00000540228 668 ntTSL 2 BASIC19.23■□□□□ 0.67
RIPK4P57078 RBM8B-201ENST00000555532 525 ntBASIC19.23■□□□□ 0.67
RIPK4P57078 NAT9-222ENST00000583476 583 ntTSL 3 BASIC19.23■□□□□ 0.67
RIPK4P57078 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19.23■□□□□ 0.67
RIPK4P57078 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC19.23■□□□□ 0.67
RIPK4P57078 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIPK4P57078 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIPK4P57078 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIPK4P57078 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIPK4P57078 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC19.23■□□□□ 0.67
RIPK4P57078 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
RIPK4P57078 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC19.23■□□□□ 0.67
RIPK4P57078 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIPK4P57078 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RIPK4P57078 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RIPK4P57078 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIPK4P57078 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC19.22■□□□□ 0.67
RIPK4P57078 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIPK4P57078 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIPK4P57078 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RIPK4P57078 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIPK4P57078 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC19.22■□□□□ 0.67
RIPK4P57078 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIPK4P57078 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RIPK4P57078 BX284668.4-201ENST00000453917 508 ntBASIC19.22■□□□□ 0.67
RIPK4P57078 AC022494.1-201ENST00000466044 728 ntBASIC19.22■□□□□ 0.67
RIPK4P57078 AC006122.1-201ENST00000493323 440 ntBASIC19.22■□□□□ 0.67
RIPK4P57078 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC19.22■□□□□ 0.67
RIPK4P57078 AC013355.1-201ENST00000562625 723 ntBASIC19.22■□□□□ 0.67
RIPK4P57078 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC19.22■□□□□ 0.67
RIPK4P57078 AP000346.4-201ENST00000614827 381 ntBASIC19.22■□□□□ 0.67
RIPK4P57078 AC244452.3-201ENST00000636814 210 ntBASIC19.22■□□□□ 0.67
RIPK4P57078 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIPK4P57078 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC19.22■□□□□ 0.67
RIPK4P57078 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIPK4P57078 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RIPK4P57078 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RIPK4P57078 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RIPK4P57078 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIPK4P57078 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC19.22■□□□□ 0.67
RIPK4P57078 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIPK4P57078 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC19.22■□□□□ 0.67
RIPK4P57078 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RIPK4P57078 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIPK4P57078 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms