Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.14□□□□□ -0.15
CLDN6P56747 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN6P56747 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN6P56747 DNM1P30-201ENST00000563586 452 ntBASIC14.14□□□□□ -0.15
CLDN6P56747 AL031713.1-201ENST00000564813 661 ntBASIC14.14□□□□□ -0.15
CLDN6P56747 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN6P56747 PHBP15-201ENST00000574228 665 ntBASIC14.14□□□□□ -0.15
CLDN6P56747 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC14.14□□□□□ -0.15
CLDN6P56747 MIR3180-2-201ENST00000581748 88 ntBASIC14.14□□□□□ -0.15
CLDN6P56747 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC14.14□□□□□ -0.15
CLDN6P56747 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CLDN6P56747 AC027601.3-201ENST00000622907 509 ntBASIC14.14□□□□□ -0.15
CLDN6P56747 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN6P56747 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN6P56747 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
CLDN6P56747 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN6P56747 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN6P56747 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN6P56747 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN6P56747 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
CLDN6P56747 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CLDN6P56747 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN6P56747 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN6P56747 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN6P56747 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CLDN6P56747 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN6P56747 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CLDN6P56747 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CLDN6P56747 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.13□□□□□ -0.15
CLDN6P56747 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.13□□□□□ -0.15
CLDN6P56747 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CLDN6P56747 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN6P56747 AL627422.1-201ENST00000434104 580 ntBASIC14.13□□□□□ -0.15
CLDN6P56747 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN6P56747 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.13□□□□□ -0.15
CLDN6P56747 AC084781.1-201ENST00000613737 656 ntBASIC14.13□□□□□ -0.15
CLDN6P56747 AC005618.3-201ENST00000624928 458 ntBASIC14.13□□□□□ -0.15
CLDN6P56747 AC023090.2-201ENST00000625182 2110 ntBASIC14.13□□□□□ -0.15
CLDN6P56747 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CLDN6P56747 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CLDN6P56747 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
CLDN6P56747 AC144831.1-201ENST00000573312 2656 ntBASIC14.13□□□□□ -0.15
CLDN6P56747 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN6P56747 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.13□□□□□ -0.15
CLDN6P56747 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CLDN6P56747 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN6P56747 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN6P56747 AC022532.1-201ENST00000624563 1728 ntBASIC14.12□□□□□ -0.15
CLDN6P56747 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDN6P56747 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.12□□□□□ -0.15
CLDN6P56747 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CLDN6P56747 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 SALL4P5-201ENST00000419001 1760 ntBASIC14.12□□□□□ -0.15
CLDN6P56747 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CLDN6P56747 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 IL9RP3-201ENST00000442856 1674 ntBASIC14.12□□□□□ -0.15
CLDN6P56747 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms