Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
NR1H2P55055 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H2P55055 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NR1H2P55055 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H2P55055 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NR1H2P55055 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NR1H2P55055 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H2P55055 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
NR1H2P55055 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H2P55055 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H2P55055 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.11□□□□□ -0.15
NR1H2P55055 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NR1H2P55055 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NR1H2P55055 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.11□□□□□ -0.15
NR1H2P55055 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H2P55055 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H2P55055 AC009477.1-201ENST00000452936 217 ntBASIC14.11□□□□□ -0.15
NR1H2P55055 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
NR1H2P55055 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.11□□□□□ -0.15
NR1H2P55055 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H2P55055 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.11□□□□□ -0.15
NR1H2P55055 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.11□□□□□ -0.15
NR1H2P55055 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.11□□□□□ -0.15
NR1H2P55055 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H2P55055 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.11□□□□□ -0.15
NR1H2P55055 AL079307.3-201ENST00000556114 283 ntBASIC14.11□□□□□ -0.15
NR1H2P55055 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.11□□□□□ -0.15
NR1H2P55055 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.11□□□□□ -0.15
NR1H2P55055 AL691432.1-201ENST00000596308 1422 ntBASIC14.11□□□□□ -0.15
NR1H2P55055 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.11□□□□□ -0.15
NR1H2P55055 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.11□□□□□ -0.15
NR1H2P55055 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H2P55055 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H2P55055 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.11□□□□□ -0.15
NR1H2P55055 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
NR1H2P55055 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H2P55055 BTBD7P1-201ENST00000447253 1453 ntBASIC14.11□□□□□ -0.15
NR1H2P55055 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H2P55055 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H2P55055 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.11□□□□□ -0.15
NR1H2P55055 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H2P55055 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H2P55055 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.11□□□□□ -0.15
NR1H2P55055 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.11□□□□□ -0.15
NR1H2P55055 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H2P55055 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H2P55055 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H2P55055 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H2P55055 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.1□□□□□ -0.15
NR1H2P55055 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H2P55055 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.1□□□□□ -0.15
NR1H2P55055 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H2P55055 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NR1H2P55055 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.1□□□□□ -0.15
NR1H2P55055 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.1□□□□□ -0.15
NR1H2P55055 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H2P55055 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.1□□□□□ -0.15
NR1H2P55055 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC14.1□□□□□ -0.15
NR1H2P55055 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H2P55055 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.1□□□□□ -0.15
NR1H2P55055 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H2P55055 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H2P55055 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.1□□□□□ -0.15
NR1H2P55055 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H2P55055 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H2P55055 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
NR1H2P55055 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H2P55055 RPL37AP1-201ENST00000412502 279 ntBASIC14.1□□□□□ -0.15
NR1H2P55055 RN7SL618P-201ENST00000477850 296 ntBASIC14.1□□□□□ -0.15
NR1H2P55055 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H2P55055 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H2P55055 ZNF890P-202ENST00000530367 1156 ntBASIC14.1□□□□□ -0.15
NR1H2P55055 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H2P55055 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.1□□□□□ -0.15
NR1H2P55055 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
NR1H2P55055 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.1□□□□□ -0.15
NR1H2P55055 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H2P55055 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.1□□□□□ -0.15
NR1H2P55055 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.1□□□□□ -0.15
NR1H2P55055 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H2P55055 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.1□□□□□ -0.15
NR1H2P55055 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NR1H2P55055 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
NR1H2P55055 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H2P55055 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H2P55055 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H2P55055 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H2P55055 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H2P55055 TNN-202ENST00000621086 4234 ntTSL 5 BASIC14.1□□□□□ -0.15
NR1H2P55055 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NR1H2P55055 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC14.1□□□□□ -0.15
NR1H2P55055 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
NR1H2P55055 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H2P55055 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
NR1H2P55055 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H2P55055 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
NR1H2P55055 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
NR1H2P55055 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms