Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ATP1B3P54709 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
ATP1B3P54709 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ATP1B3P54709 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.9□□□□□ -0.34
ATP1B3P54709 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ATP1B3P54709 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ATP1B3P54709 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
ATP1B3P54709 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.9□□□□□ -0.34
ATP1B3P54709 AL442647.2-201ENST00000429864 857 ntBASIC12.9□□□□□ -0.34
ATP1B3P54709 GNAQP1-201ENST00000444815 1067 ntBASIC12.9□□□□□ -0.34
ATP1B3P54709 AC114812.1-204ENST00000449669 728 ntBASIC12.9□□□□□ -0.34
ATP1B3P54709 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.9□□□□□ -0.34
ATP1B3P54709 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.9□□□□□ -0.34
ATP1B3P54709 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ATP1B3P54709 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.9□□□□□ -0.34
ATP1B3P54709 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ATP1B3P54709 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.9□□□□□ -0.34
ATP1B3P54709 AC022447.6-201ENST00000515522 438 ntBASIC12.9□□□□□ -0.34
ATP1B3P54709 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ATP1B3P54709 AP001582.1-201ENST00000525856 295 ntBASIC12.9□□□□□ -0.34
ATP1B3P54709 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ATP1B3P54709 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.9□□□□□ -0.34
ATP1B3P54709 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
ATP1B3P54709 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.9□□□□□ -0.34
ATP1B3P54709 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.9□□□□□ -0.34
ATP1B3P54709 ORC5-208ENST00000626700 344 ntTSL 3 BASIC12.9□□□□□ -0.34
ATP1B3P54709 AL603764.1-201ENST00000636452 321 ntBASIC12.9□□□□□ -0.34
ATP1B3P54709 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ATP1B3P54709 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ATP1B3P54709 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ATP1B3P54709 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ATP1B3P54709 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.9□□□□□ -0.34
ATP1B3P54709 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ATP1B3P54709 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.9□□□□□ -0.34
ATP1B3P54709 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ATP1B3P54709 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
ATP1B3P54709 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
ATP1B3P54709 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ATP1B3P54709 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ATP1B3P54709 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.9□□□□□ -0.34
ATP1B3P54709 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ATP1B3P54709 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
ATP1B3P54709 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.9□□□□□ -0.35
ATP1B3P54709 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
ATP1B3P54709 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.35
ATP1B3P54709 PPT1-213ENST00000641319 2388 ntBASIC12.89□□□□□ -0.35
ATP1B3P54709 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATP1B3P54709 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATP1B3P54709 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.89□□□□□ -0.35
ATP1B3P54709 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
ATP1B3P54709 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
ATP1B3P54709 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATP1B3P54709 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.89□□□□□ -0.35
ATP1B3P54709 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ATP1B3P54709 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
ATP1B3P54709 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATP1B3P54709 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ATP1B3P54709 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATP1B3P54709 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.89□□□□□ -0.35
ATP1B3P54709 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATP1B3P54709 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ATP1B3P54709 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATP1B3P54709 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATP1B3P54709 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.89□□□□□ -0.35
ATP1B3P54709 SOCS2P1-201ENST00000417727 557 ntBASIC12.89□□□□□ -0.35
ATP1B3P54709 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATP1B3P54709 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATP1B3P54709 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.89□□□□□ -0.35
ATP1B3P54709 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.89□□□□□ -0.35
ATP1B3P54709 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.89□□□□□ -0.35
ATP1B3P54709 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.89□□□□□ -0.35
ATP1B3P54709 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.89□□□□□ -0.35
ATP1B3P54709 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.89□□□□□ -0.35
ATP1B3P54709 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.89□□□□□ -0.35
ATP1B3P54709 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.89□□□□□ -0.35
ATP1B3P54709 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATP1B3P54709 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.89□□□□□ -0.35
ATP1B3P54709 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.89□□□□□ -0.35
ATP1B3P54709 AC093726.1-201ENST00000608064 963 ntBASIC12.89□□□□□ -0.35
ATP1B3P54709 AC004790.1-201ENST00000612686 536 ntBASIC12.89□□□□□ -0.35
ATP1B3P54709 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.89□□□□□ -0.35
ATP1B3P54709 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.89□□□□□ -0.35
ATP1B3P54709 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.89□□□□□ -0.35
ATP1B3P54709 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATP1B3P54709 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.89□□□□□ -0.35
ATP1B3P54709 SLC7A15P-201ENST00000424028 1363 ntBASIC12.89□□□□□ -0.35
ATP1B3P54709 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.89□□□□□ -0.35
ATP1B3P54709 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.89□□□□□ -0.35
ATP1B3P54709 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.89□□□□□ -0.35
ATP1B3P54709 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ATP1B3P54709 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
ATP1B3P54709 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.89□□□□□ -0.35
ATP1B3P54709 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
ATP1B3P54709 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
ATP1B3P54709 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
ATP1B3P54709 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ATP1B3P54709 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATP1B3P54709 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms