Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC084346.2-201ENST00000607097 949 ntBASIC16.26■□□□□ 0.19
GPC3P51654 AC100757.4-201ENST00000626934 759 ntBASIC16.26■□□□□ 0.19
GPC3P51654 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC3P51654 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
GPC3P51654 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC3P51654 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
GPC3P51654 MIR600HG-201ENST00000449175 5984 ntBASIC16.26■□□□□ 0.19
GPC3P51654 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
GPC3P51654 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.26■□□□□ 0.19
GPC3P51654 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC3P51654 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC3P51654 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
GPC3P51654 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC3P51654 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC3P51654 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GPC3P51654 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.26■□□□□ 0.19
GPC3P51654 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.26■□□□□ 0.19
GPC3P51654 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC3P51654 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GPC3P51654 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
GPC3P51654 FAM90A7P-201ENST00000382628 1395 ntBASIC16.26■□□□□ 0.19
GPC3P51654 FAM90A23P-201ENST00000400136 1395 ntBASIC16.26■□□□□ 0.19
GPC3P51654 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.25■□□□□ 0.19
GPC3P51654 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC3P51654 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.25■□□□□ 0.19
GPC3P51654 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.25■□□□□ 0.19
GPC3P51654 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
GPC3P51654 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC3P51654 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC3P51654 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC3P51654 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GPC3P51654 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC3P51654 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC3P51654 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC3P51654 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.25■□□□□ 0.19
GPC3P51654 ACTG1P2-201ENST00000415776 1125 ntBASIC16.25■□□□□ 0.19
GPC3P51654 ACTG1P11-201ENST00000425411 1125 ntBASIC16.25■□□□□ 0.19
GPC3P51654 AL035414.1-201ENST00000451327 857 ntBASIC16.25■□□□□ 0.19
GPC3P51654 RN7SL11P-201ENST00000471305 293 ntBASIC16.25■□□□□ 0.19
GPC3P51654 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.25■□□□□ 0.19
GPC3P51654 AC125604.1-201ENST00000496255 707 ntBASIC16.25■□□□□ 0.19
GPC3P51654 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.25■□□□□ 0.19
GPC3P51654 RHOQP1-201ENST00000555758 579 ntBASIC16.25■□□□□ 0.19
GPC3P51654 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.25■□□□□ 0.19
GPC3P51654 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC3P51654 AC008805.1-201ENST00000590892 364 ntBASIC16.25■□□□□ 0.19
GPC3P51654 AC009884.2-201ENST00000603110 324 ntBASIC16.25■□□□□ 0.19
GPC3P51654 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC3P51654 AP001505.2-201ENST00000616815 443 ntBASIC16.25■□□□□ 0.19
GPC3P51654 AL805961.1-203ENST00000641078 1258 ntBASIC16.25■□□□□ 0.19
GPC3P51654 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC3P51654 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC3P51654 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
GPC3P51654 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GPC3P51654 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC3P51654 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC3P51654 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC3P51654 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
GPC3P51654 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC3P51654 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
GPC3P51654 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GPC3P51654 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC3P51654 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
GPC3P51654 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.24■□□□□ 0.19
GPC3P51654 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.24■□□□□ 0.19
GPC3P51654 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC3P51654 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC3P51654 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
GPC3P51654 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GPC3P51654 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC3P51654 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GPC3P51654 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC3P51654 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GPC3P51654 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
GPC3P51654 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC3P51654 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GPC3P51654 AL645933.1-201ENST00000440087 609 ntBASIC16.24■□□□□ 0.19
GPC3P51654 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.24■□□□□ 0.19
GPC3P51654 SCARNA21-201ENST00000517026 139 ntBASIC16.24■□□□□ 0.19
GPC3P51654 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.24■□□□□ 0.19
GPC3P51654 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.24■□□□□ 0.19
GPC3P51654 AL132994.2-201ENST00000603120 687 ntBASIC16.24■□□□□ 0.19
GPC3P51654 AC106872.11-201ENST00000605838 421 ntBASIC16.24■□□□□ 0.19
GPC3P51654 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.24■□□□□ 0.19
GPC3P51654 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.24■□□□□ 0.19
GPC3P51654 AC140479.7-201ENST00000636301 2332 ntBASIC16.24■□□□□ 0.19
GPC3P51654 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
GPC3P51654 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.24■□□□□ 0.19
GPC3P51654 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC3P51654 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.24■□□□□ 0.19
GPC3P51654 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.24■□□□□ 0.19
GPC3P51654 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC3P51654 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GPC3P51654 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC3P51654 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.24■□□□□ 0.19
GPC3P51654 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GPC3P51654 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
GPC3P51654 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.24■□□□□ 0.19
GPC3P51654 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
GPC3P51654 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms