Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.52□□□□□ -0.25
CENPAP49450 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.52□□□□□ -0.25
CENPAP49450 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.52□□□□□ -0.25
CENPAP49450 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CENPAP49450 AC023310.3-201ENST00000557027 670 ntBASIC13.52□□□□□ -0.25
CENPAP49450 AC100756.1-201ENST00000562736 682 ntBASIC13.52□□□□□ -0.25
CENPAP49450 AC138749.3-201ENST00000567691 622 ntBASIC13.52□□□□□ -0.25
CENPAP49450 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.52□□□□□ -0.25
CENPAP49450 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CENPAP49450 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CENPAP49450 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.52□□□□□ -0.25
CENPAP49450 AC116165.1-201ENST00000611806 668 ntBASIC13.52□□□□□ -0.25
CENPAP49450 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.52□□□□□ -0.25
CENPAP49450 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.52□□□□□ -0.25
CENPAP49450 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.52□□□□□ -0.25
CENPAP49450 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.52□□□□□ -0.25
CENPAP49450 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.52□□□□□ -0.25
CENPAP49450 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CENPAP49450 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CENPAP49450 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CENPAP49450 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.52□□□□□ -0.25
CENPAP49450 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CENPAP49450 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.52□□□□□ -0.25
CENPAP49450 AL158070.2-201ENST00000623713 1621 ntBASIC13.52□□□□□ -0.25
CENPAP49450 AL138799.1-201ENST00000448213 1675 ntBASIC13.52□□□□□ -0.25
CENPAP49450 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CENPAP49450 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.52□□□□□ -0.25
CENPAP49450 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CENPAP49450 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC13.52□□□□□ -0.25
CENPAP49450 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CENPAP49450 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.52□□□□□ -0.25
CENPAP49450 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CENPAP49450 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.52□□□□□ -0.25
CENPAP49450 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.52□□□□□ -0.25
CENPAP49450 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.52□□□□□ -0.25
CENPAP49450 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CENPAP49450 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.52□□□□□ -0.25
CENPAP49450 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.52□□□□□ -0.25
CENPAP49450 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CENPAP49450 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CENPAP49450 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CENPAP49450 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CENPAP49450 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CENPAP49450 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CENPAP49450 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CENPAP49450 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.51□□□□□ -0.25
CENPAP49450 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CENPAP49450 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CENPAP49450 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CENPAP49450 AC097359.2-201ENST00000604992 2389 ntBASIC13.51□□□□□ -0.25
CENPAP49450 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CENPAP49450 AL137783.1-201ENST00000623494 1896 ntBASIC13.51□□□□□ -0.25
CENPAP49450 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CENPAP49450 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CENPAP49450 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.51□□□□□ -0.25
CENPAP49450 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CENPAP49450 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CENPAP49450 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CENPAP49450 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CENPAP49450 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CENPAP49450 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CENPAP49450 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CENPAP49450 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CENPAP49450 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CENPAP49450 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.51□□□□□ -0.25
CENPAP49450 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CENPAP49450 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.51□□□□□ -0.25
CENPAP49450 GNAQP1-201ENST00000444815 1067 ntBASIC13.51□□□□□ -0.25
CENPAP49450 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CENPAP49450 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.51□□□□□ -0.25
CENPAP49450 RN7SL399P-201ENST00000471648 279 ntBASIC13.51□□□□□ -0.25
CENPAP49450 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.51□□□□□ -0.25
CENPAP49450 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.51□□□□□ -0.25
CENPAP49450 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.51□□□□□ -0.25
CENPAP49450 AL390955.2-201ENST00000603032 514 ntBASIC13.51□□□□□ -0.25
CENPAP49450 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.51□□□□□ -0.25
CENPAP49450 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.51□□□□□ -0.25
CENPAP49450 AL603764.1-201ENST00000636452 321 ntBASIC13.51□□□□□ -0.25
CENPAP49450 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CENPAP49450 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
CENPAP49450 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CENPAP49450 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CENPAP49450 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CENPAP49450 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CENPAP49450 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CENPAP49450 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC13.51□□□□□ -0.25
CENPAP49450 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CENPAP49450 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CENPAP49450 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CENPAP49450 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CENPAP49450 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CENPAP49450 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CENPAP49450 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
CENPAP49450 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.5□□□□□ -0.25
CENPAP49450 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms