Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.16□□□□□ -0.46
NKX2-1P43699 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
NKX2-1P43699 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
NKX2-1P43699 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.16□□□□□ -0.46
NKX2-1P43699 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.16□□□□□ -0.46
NKX2-1P43699 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.16□□□□□ -0.46
NKX2-1P43699 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.16□□□□□ -0.46
NKX2-1P43699 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
NKX2-1P43699 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.16□□□□□ -0.46
NKX2-1P43699 AL033527.5-202ENST00000641632 1098 ntBASIC12.16□□□□□ -0.46
NKX2-1P43699 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
NKX2-1P43699 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.16□□□□□ -0.46
NKX2-1P43699 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 NUTM2HP-201ENST00000442076 2498 ntBASIC12.16□□□□□ -0.46
NKX2-1P43699 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.16□□□□□ -0.46
NKX2-1P43699 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
NKX2-1P43699 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.16□□□□□ -0.46
NKX2-1P43699 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 MYADML-201ENST00000474610 2147 ntBASIC12.16□□□□□ -0.46
NKX2-1P43699 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
NKX2-1P43699 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
NKX2-1P43699 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.15□□□□□ -0.46
NKX2-1P43699 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-1P43699 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.15□□□□□ -0.46
NKX2-1P43699 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-1P43699 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-1P43699 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.15□□□□□ -0.46
NKX2-1P43699 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
NKX2-1P43699 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-1P43699 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-1P43699 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
NKX2-1P43699 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-1P43699 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-1P43699 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-1P43699 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-1P43699 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-1P43699 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-1P43699 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.15□□□□□ -0.46
NKX2-1P43699 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.15□□□□□ -0.46
NKX2-1P43699 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-1P43699 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-1P43699 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
NKX2-1P43699 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.15□□□□□ -0.46
NKX2-1P43699 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-1P43699 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
NKX2-1P43699 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.15□□□□□ -0.46
NKX2-1P43699 KRT18P32-201ENST00000424695 1287 ntBASIC12.15□□□□□ -0.46
NKX2-1P43699 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.15□□□□□ -0.46
NKX2-1P43699 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.15□□□□□ -0.46
NKX2-1P43699 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.15□□□□□ -0.46
NKX2-1P43699 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.15□□□□□ -0.46
NKX2-1P43699 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
NKX2-1P43699 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.15□□□□□ -0.46
NKX2-1P43699 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.15□□□□□ -0.46
NKX2-1P43699 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.15□□□□□ -0.46
NKX2-1P43699 AC000095.1-201ENST00000603208 874 ntBASIC12.15□□□□□ -0.46
NKX2-1P43699 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.15□□□□□ -0.46
NKX2-1P43699 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-1P43699 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-1P43699 AC215219.1-201ENST00000400706 1817 ntBASIC12.15□□□□□ -0.46
NKX2-1P43699 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-1P43699 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.15□□□□□ -0.46
NKX2-1P43699 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.15□□□□□ -0.46
NKX2-1P43699 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-1P43699 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-1P43699 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
NKX2-1P43699 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-1P43699 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-1P43699 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-1P43699 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-1P43699 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.15□□□□□ -0.46
NKX2-1P43699 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-1P43699 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
NKX2-1P43699 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-1P43699 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
NKX2-1P43699 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
NKX2-1P43699 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
NKX2-1P43699 AC020658.7-201ENST00000624274 2442 ntBASIC12.15□□□□□ -0.47
NKX2-1P43699 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.14□□□□□ -0.47
NKX2-1P43699 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms