Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PDE6BP35913 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC17.95■□□□□ 0.46
PDE6BP35913 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6BP35913 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6BP35913 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6BP35913 PYY2-201ENST00000315776 282 ntBASIC17.95■□□□□ 0.46
PDE6BP35913 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6BP35913 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PDE6BP35913 SAT1-201ENST00000379251 801 ntTSL 2 BASIC17.95■□□□□ 0.46
PDE6BP35913 SAT1-202ENST00000379253 909 ntTSL 2 BASIC17.95■□□□□ 0.46
PDE6BP35913 SAT1-203ENST00000379254 868 ntTSL 3 BASIC17.95■□□□□ 0.46
PDE6BP35913 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6BP35913 CELP-201ENST00000411440 1249 ntTSL 5 BASIC17.95■□□□□ 0.46
PDE6BP35913 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6BP35913 KRT17P4-201ENST00000429445 819 ntBASIC17.95■□□□□ 0.46
PDE6BP35913 AL135901.1-201ENST00000451812 333 ntBASIC17.95■□□□□ 0.46
PDE6BP35913 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC17.95■□□□□ 0.46
PDE6BP35913 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PDE6BP35913 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC17.95■□□□□ 0.46
PDE6BP35913 FAM86B3P-203ENST00000523992 854 ntBASIC17.95■□□□□ 0.46
PDE6BP35913 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC17.95■□□□□ 0.46
PDE6BP35913 AC140658.4-201ENST00000561990 352 ntBASIC17.95■□□□□ 0.46
PDE6BP35913 AL118516.1-201ENST00000564152 670 ntBASIC17.95■□□□□ 0.46
PDE6BP35913 ELP5-212ENST00000574255 671 ntTSL 2 BASIC17.95■□□□□ 0.46
PDE6BP35913 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC17.95■□□□□ 0.46
PDE6BP35913 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC17.95■□□□□ 0.46
PDE6BP35913 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6BP35913 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6BP35913 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6BP35913 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PDE6BP35913 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.95■□□□□ 0.46
PDE6BP35913 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6BP35913 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6BP35913 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6BP35913 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.95■□□□□ 0.46
PDE6BP35913 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6BP35913 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.94■□□□□ 0.46
PDE6BP35913 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6BP35913 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.94■□□□□ 0.46
PDE6BP35913 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6BP35913 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6BP35913 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PDE6BP35913 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PDE6BP35913 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
PDE6BP35913 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6BP35913 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.94■□□□□ 0.46
PDE6BP35913 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6BP35913 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC17.94■□□□□ 0.46
PDE6BP35913 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6BP35913 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6BP35913 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6BP35913 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.94■□□□□ 0.46
PDE6BP35913 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6BP35913 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6BP35913 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6BP35913 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC17.94■□□□□ 0.46
PDE6BP35913 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6BP35913 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC17.94■□□□□ 0.46
PDE6BP35913 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
PDE6BP35913 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC17.94■□□□□ 0.46
PDE6BP35913 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC17.94■□□□□ 0.46
PDE6BP35913 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC17.94■□□□□ 0.46
PDE6BP35913 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
PDE6BP35913 AC090386.2-201ENST00000623010 1039 ntBASIC17.94■□□□□ 0.46
PDE6BP35913 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC17.94■□□□□ 0.46
PDE6BP35913 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
PDE6BP35913 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6BP35913 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6BP35913 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
PDE6BP35913 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PDE6BP35913 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6BP35913 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
PDE6BP35913 AL136379.1-201ENST00000623471 2642 ntBASIC17.94■□□□□ 0.46
PDE6BP35913 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6BP35913 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC17.94■□□□□ 0.46
PDE6BP35913 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6BP35913 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6BP35913 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC17.94■□□□□ 0.46
PDE6BP35913 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.94■□□□□ 0.46
PDE6BP35913 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.94■□□□□ 0.46
PDE6BP35913 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6BP35913 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6BP35913 BRD7P5-201ENST00000299197 1822 ntBASIC17.93■□□□□ 0.46
PDE6BP35913 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PDE6BP35913 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6BP35913 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
PDE6BP35913 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6BP35913 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.93■□□□□ 0.46
PDE6BP35913 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6BP35913 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6BP35913 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PDE6BP35913 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PDE6BP35913 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6BP35913 RGS5-216ENST00000449680 788 ntTSL 3 BASIC17.93■□□□□ 0.46
PDE6BP35913 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC17.93■□□□□ 0.46
PDE6BP35913 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.93■□□□□ 0.46
PDE6BP35913 CD164-210ENST00000512821 964 ntTSL 2 BASIC17.93■□□□□ 0.46
PDE6BP35913 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC17.93■□□□□ 0.46
PDE6BP35913 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6BP35913 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms