Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC18.75■□□□□ 0.59
RXRBP28702 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC18.75■□□□□ 0.59
RXRBP28702 AL359219.1-201ENST00000556311 934 ntBASIC18.75■□□□□ 0.59
RXRBP28702 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC18.75■□□□□ 0.59
RXRBP28702 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RXRBP28702 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC18.75■□□□□ 0.59
RXRBP28702 AC097474.1-201ENST00000506481 1371 ntBASIC18.75■□□□□ 0.59
RXRBP28702 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RXRBP28702 FZD10-202ENST00000539839 3282 ntBASIC18.75■□□□□ 0.59
RXRBP28702 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RXRBP28702 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC18.75■□□□□ 0.59
RXRBP28702 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RXRBP28702 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RXRBP28702 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC18.75■□□□□ 0.59
RXRBP28702 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
RXRBP28702 SSR4P1-203ENST00000599569 2260 ntBASIC18.75■□□□□ 0.59
RXRBP28702 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RXRBP28702 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RXRBP28702 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RXRBP28702 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RXRBP28702 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RXRBP28702 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RXRBP28702 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RXRBP28702 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RXRBP28702 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RXRBP28702 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RXRBP28702 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RXRBP28702 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.74■□□□□ 0.59
RXRBP28702 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RXRBP28702 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RXRBP28702 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RXRBP28702 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RXRBP28702 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RXRBP28702 MIR632-201ENST00000385193 94 ntBASIC18.74■□□□□ 0.59
RXRBP28702 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RXRBP28702 CRIP1P2-201ENST00000425396 228 ntBASIC18.74■□□□□ 0.59
RXRBP28702 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC18.74■□□□□ 0.59
RXRBP28702 CA5BP1-205ENST00000435806 1064 ntBASIC18.74■□□□□ 0.59
RXRBP28702 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC18.74■□□□□ 0.59
RXRBP28702 UGT1A12P-201ENST00000447084 853 ntBASIC18.74■□□□□ 0.59
RXRBP28702 AC009517.1-201ENST00000454750 570 ntBASIC18.74■□□□□ 0.59
RXRBP28702 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC18.74■□□□□ 0.59
RXRBP28702 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC18.74■□□□□ 0.59
RXRBP28702 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RXRBP28702 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC18.74■□□□□ 0.59
RXRBP28702 PPY-202ENST00000587006 431 ntTSL 3 BASIC18.74■□□□□ 0.59
RXRBP28702 AC239600.1-201ENST00000603201 462 ntBASIC18.74■□□□□ 0.59
RXRBP28702 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RXRBP28702 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.74■□□□□ 0.59
RXRBP28702 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RXRBP28702 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.74■□□□□ 0.59
RXRBP28702 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RXRBP28702 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RXRBP28702 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RXRBP28702 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RXRBP28702 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC18.74■□□□□ 0.59
RXRBP28702 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.74■□□□□ 0.59
RXRBP28702 AC009090.5-201ENST00000624886 2285 ntBASIC18.74■□□□□ 0.59
RXRBP28702 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RXRBP28702 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RXRBP28702 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
RXRBP28702 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RXRBP28702 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RXRBP28702 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RXRBP28702 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RXRBP28702 CCL19-202ENST00000378800 414 ntTSL 2 BASIC18.73■□□□□ 0.59
RXRBP28702 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC18.73■□□□□ 0.59
RXRBP28702 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC18.73■□□□□ 0.59
RXRBP28702 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC18.73■□□□□ 0.59
RXRBP28702 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC18.73■□□□□ 0.59
RXRBP28702 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC18.73■□□□□ 0.59
RXRBP28702 DUX4L31-201ENST00000446466 1136 ntBASIC18.73■□□□□ 0.59
RXRBP28702 AF186996.6-201ENST00000485294 149 ntBASIC18.73■□□□□ 0.59
RXRBP28702 AL450346.2-201ENST00000495602 1024 ntBASIC18.73■□□□□ 0.59
RXRBP28702 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC18.73■□□□□ 0.59
RXRBP28702 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RXRBP28702 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC18.73■□□□□ 0.59
RXRBP28702 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RXRBP28702 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RXRBP28702 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RXRBP28702 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.73■□□□□ 0.59
RXRBP28702 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RXRBP28702 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RXRBP28702 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RXRBP28702 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RXRBP28702 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RXRBP28702 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC18.72■□□□□ 0.59
RXRBP28702 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC18.72■□□□□ 0.59
RXRBP28702 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RXRBP28702 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RXRBP28702 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RXRBP28702 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RXRBP28702 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RXRBP28702 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC18.72■□□□□ 0.59
RXRBP28702 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RXRBP28702 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RXRBP28702 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RXRBP28702 PPP1R2P10-201ENST00000393023 595 ntBASIC18.72■□□□□ 0.59
RXRBP28702 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RXRBP28702 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms