Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
ABCD3P28288 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ABCD3P28288 LINC00552-201ENST00000625151 2579 ntBASIC13.62□□□□□ -0.23
ABCD3P28288 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
ABCD3P28288 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.62□□□□□ -0.23
ABCD3P28288 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ABCD3P28288 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.61□□□□□ -0.23
ABCD3P28288 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
ABCD3P28288 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ABCD3P28288 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
ABCD3P28288 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.61□□□□□ -0.23
ABCD3P28288 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 AC015688.4-201ENST00000580780 1647 ntBASIC13.61□□□□□ -0.23
ABCD3P28288 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.61□□□□□ -0.23
ABCD3P28288 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.61□□□□□ -0.23
ABCD3P28288 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.61□□□□□ -0.23
ABCD3P28288 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 REXO1L6P-201ENST00000603433 1515 ntBASIC13.61□□□□□ -0.23
ABCD3P28288 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 AGGF1P1-201ENST00000509500 2073 ntBASIC13.61□□□□□ -0.23
ABCD3P28288 AC232323.1-201ENST00000540724 2099 ntBASIC13.61□□□□□ -0.23
ABCD3P28288 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.61□□□□□ -0.23
ABCD3P28288 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.61□□□□□ -0.23
ABCD3P28288 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 BRWD1P1-201ENST00000401091 371 ntBASIC13.61□□□□□ -0.23
ABCD3P28288 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.61□□□□□ -0.23
ABCD3P28288 AC007274.1-201ENST00000439805 662 ntBASIC13.61□□□□□ -0.23
ABCD3P28288 HSPB1P2-201ENST00000448722 546 ntBASIC13.61□□□□□ -0.23
ABCD3P28288 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ABCD3P28288 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.61□□□□□ -0.23
ABCD3P28288 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.61□□□□□ -0.23
ABCD3P28288 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 AC103988.2-201ENST00000561804 725 ntBASIC13.61□□□□□ -0.23
ABCD3P28288 DUX4L46-201ENST00000566845 751 ntBASIC13.61□□□□□ -0.23
ABCD3P28288 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.61□□□□□ -0.23
ABCD3P28288 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.61□□□□□ -0.23
ABCD3P28288 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.61□□□□□ -0.23
ABCD3P28288 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 AC027601.3-201ENST00000622907 509 ntBASIC13.61□□□□□ -0.23
ABCD3P28288 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.61□□□□□ -0.23
ABCD3P28288 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
ABCD3P28288 E2F3P2-201ENST00000447755 1422 ntBASIC13.61□□□□□ -0.23
ABCD3P28288 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.61□□□□□ -0.23
ABCD3P28288 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.61□□□□□ -0.23
ABCD3P28288 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.61□□□□□ -0.23
ABCD3P28288 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.61□□□□□ -0.23
ABCD3P28288 AL590440.2-201ENST00000641973 1595 ntBASIC13.61□□□□□ -0.23
ABCD3P28288 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.61□□□□□ -0.23
ABCD3P28288 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ABCD3P28288 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
ABCD3P28288 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ABCD3P28288 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.6□□□□□ -0.23
ABCD3P28288 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.6□□□□□ -0.23
ABCD3P28288 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 AC006504.5-208ENST00000588784 2401 ntBASIC13.6□□□□□ -0.23
ABCD3P28288 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.6□□□□□ -0.23
ABCD3P28288 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ABCD3P28288 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.6□□□□□ -0.23
ABCD3P28288 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms