Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO1P25800 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LMO1P25800 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LMO1P25800 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.41□□□□□ -0.42
LMO1P25800 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO1P25800 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.41□□□□□ -0.42
LMO1P25800 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.41□□□□□ -0.42
LMO1P25800 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LMO1P25800 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
LMO1P25800 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO1P25800 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO1P25800 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO1P25800 AC139712.1-201ENST00000378256 1875 ntBASIC12.41□□□□□ -0.42
LMO1P25800 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.41□□□□□ -0.42
LMO1P25800 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO1P25800 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.41□□□□□ -0.42
LMO1P25800 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO1P25800 RN7SKP175-201ENST00000408472 289 ntBASIC12.41□□□□□ -0.42
LMO1P25800 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.41□□□□□ -0.42
LMO1P25800 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.41□□□□□ -0.42
LMO1P25800 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.41□□□□□ -0.42
LMO1P25800 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO1P25800 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LMO1P25800 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.41□□□□□ -0.42
LMO1P25800 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.41□□□□□ -0.42
LMO1P25800 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.41□□□□□ -0.42
LMO1P25800 CR383656.12-201ENST00000549567 513 ntBASIC12.41□□□□□ -0.42
LMO1P25800 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.41□□□□□ -0.42
LMO1P25800 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.41□□□□□ -0.42
LMO1P25800 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LMO1P25800 AL008721.1-201ENST00000609964 604 ntBASIC12.41□□□□□ -0.42
LMO1P25800 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO1P25800 AC020910.5-201ENST00000623668 1865 ntBASIC12.41□□□□□ -0.42
LMO1P25800 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO1P25800 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.41□□□□□ -0.42
LMO1P25800 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
LMO1P25800 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.41□□□□□ -0.42
LMO1P25800 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LMO1P25800 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LMO1P25800 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LMO1P25800 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO1P25800 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO1P25800 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.41□□□□□ -0.42
LMO1P25800 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO1P25800 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO1P25800 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO1P25800 NUTM2HP-201ENST00000442076 2498 ntBASIC12.4□□□□□ -0.42
LMO1P25800 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
LMO1P25800 AC015688.4-201ENST00000580780 1647 ntBASIC12.4□□□□□ -0.42
LMO1P25800 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
LMO1P25800 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
LMO1P25800 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.4□□□□□ -0.42
LMO1P25800 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LMO1P25800 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO1P25800 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
LMO1P25800 PKD1P5-201ENST00000532415 10291 ntBASIC12.4□□□□□ -0.42
LMO1P25800 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LMO1P25800 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO1P25800 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LMO1P25800 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.4□□□□□ -0.42
LMO1P25800 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.4□□□□□ -0.42
LMO1P25800 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO1P25800 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.4□□□□□ -0.42
LMO1P25800 CU639417.3-201ENST00000624240 1404 ntBASIC12.4□□□□□ -0.42
LMO1P25800 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO1P25800 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
LMO1P25800 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO1P25800 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO1P25800 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO1P25800 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.4□□□□□ -0.42
LMO1P25800 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
LMO1P25800 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO1P25800 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO1P25800 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
LMO1P25800 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LMO1P25800 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.4□□□□□ -0.42
LMO1P25800 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.4□□□□□ -0.42
LMO1P25800 C2orf27AP3-201ENST00000434123 579 ntBASIC12.4□□□□□ -0.42
LMO1P25800 TMEM198B-204ENST00000484016 896 ntBASIC12.4□□□□□ -0.42
LMO1P25800 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
LMO1P25800 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.4□□□□□ -0.42
LMO1P25800 USP32P1-208ENST00000506594 1164 ntBASIC12.4□□□□□ -0.42
LMO1P25800 AL391280.1-201ENST00000506969 1062 ntBASIC12.4□□□□□ -0.42
LMO1P25800 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.4□□□□□ -0.42
LMO1P25800 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
LMO1P25800 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.4□□□□□ -0.42
LMO1P25800 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.4□□□□□ -0.42
LMO1P25800 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.4□□□□□ -0.42
LMO1P25800 AC106820.3-201ENST00000561653 397 ntBASIC12.4□□□□□ -0.42
LMO1P25800 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.4□□□□□ -0.42
LMO1P25800 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.4□□□□□ -0.42
LMO1P25800 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.4□□□□□ -0.42
LMO1P25800 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO1P25800 AC233724.13-201ENST00000598383 410 ntBASIC12.4□□□□□ -0.42
LMO1P25800 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.4□□□□□ -0.42
LMO1P25800 AL359881.2-201ENST00000602973 570 ntBASIC12.4□□□□□ -0.42
LMO1P25800 AL022328.1-201ENST00000610050 478 ntBASIC12.4□□□□□ -0.42
LMO1P25800 AL354718.3-201ENST00000616414 581 ntBASIC12.4□□□□□ -0.42
LMO1P25800 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
LMO1P25800 CR382287.1-201ENST00000623954 586 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms