Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AL022328.1-201ENST00000610050 478 ntBASIC13.89□□□□□ -0.19
CHMP24386 MIR6752-201ENST00000618442 71 ntBASIC13.89□□□□□ -0.19
CHMP24386 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.89□□□□□ -0.19
CHMP24386 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.89□□□□□ -0.19
CHMP24386 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHMP24386 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.89□□□□□ -0.19
CHMP24386 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.89□□□□□ -0.19
CHMP24386 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHMP24386 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHMP24386 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.89□□□□□ -0.19
CHMP24386 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHMP24386 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHMP24386 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.89□□□□□ -0.19
CHMP24386 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHMP24386 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHMP24386 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.89□□□□□ -0.19
CHMP24386 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CHMP24386 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHMP24386 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.89□□□□□ -0.19
CHMP24386 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHMP24386 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CHMP24386 AC093525.8-201ENST00000624099 1342 ntBASIC13.89□□□□□ -0.19
CHMP24386 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHMP24386 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CHMP24386 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
CHMP24386 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 AC107918.4-201ENST00000641966 3141 ntBASIC13.88□□□□□ -0.19
CHMP24386 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
CHMP24386 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.88□□□□□ -0.19
CHMP24386 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.88□□□□□ -0.19
CHMP24386 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CHMP24386 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CHMP24386 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.88□□□□□ -0.19
CHMP24386 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.88□□□□□ -0.19
CHMP24386 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.88□□□□□ -0.19
CHMP24386 AC114812.1-204ENST00000449669 728 ntBASIC13.88□□□□□ -0.19
CHMP24386 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.88□□□□□ -0.19
CHMP24386 ACA64.2-201ENST00000459014 129 ntBASIC13.88□□□□□ -0.19
CHMP24386 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.88□□□□□ -0.19
CHMP24386 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CHMP24386 KRT18P25-201ENST00000508931 1278 ntBASIC13.88□□□□□ -0.19
CHMP24386 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.88□□□□□ -0.19
CHMP24386 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.88□□□□□ -0.19
CHMP24386 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.88□□□□□ -0.19
CHMP24386 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CHMP24386 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.88□□□□□ -0.19
CHMP24386 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 MIR6805-201ENST00000615055 62 ntBASIC13.88□□□□□ -0.19
CHMP24386 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.88□□□□□ -0.19
CHMP24386 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CHMP24386 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.88□□□□□ -0.19
CHMP24386 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.88□□□□□ -0.19
CHMP24386 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.88□□□□□ -0.19
CHMP24386 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.88□□□□□ -0.19
CHMP24386 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CHMP24386 AC134312.5-201ENST00000568031 1313 ntBASIC13.88□□□□□ -0.19
CHMP24386 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
CHMP24386 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHMP24386 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CHMP24386 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.87□□□□□ -0.19
CHMP24386 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.87□□□□□ -0.19
CHMP24386 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
CHMP24386 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.87□□□□□ -0.19
CHMP24386 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHMP24386 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
CHMP24386 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CHMP24386 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CHMP24386 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHMP24386 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHMP24386 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.87□□□□□ -0.19
CHMP24386 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CHMP24386 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHMP24386 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHMP24386 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHMP24386 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CHMP24386 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms