Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.36■□□□□ 0.37
TOP1P11387 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.36■□□□□ 0.37
TOP1P11387 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.36■□□□□ 0.37
TOP1P11387 DUX4L46-201ENST00000566845 751 ntBASIC17.36■□□□□ 0.37
TOP1P11387 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.36■□□□□ 0.37
TOP1P11387 AC007663.3-201ENST00000609632 465 ntBASIC17.36■□□□□ 0.37
TOP1P11387 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.36■□□□□ 0.37
TOP1P11387 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.36■□□□□ 0.37
TOP1P11387 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TOP1P11387 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.36■□□□□ 0.37
TOP1P11387 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.36■□□□□ 0.37
TOP1P11387 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TOP1P11387 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TOP1P11387 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TOP1P11387 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TOP1P11387 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TOP1P11387 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TOP1P11387 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TOP1P11387 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TOP1P11387 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TOP1P11387 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TOP1P11387 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
TOP1P11387 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.35■□□□□ 0.37
TOP1P11387 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TOP1P11387 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TOP1P11387 AC018442.1-201ENST00000421439 2061 ntBASIC17.35■□□□□ 0.37
TOP1P11387 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TOP1P11387 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TOP1P11387 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TOP1P11387 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TOP1P11387 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.35■□□□□ 0.37
TOP1P11387 AC005912.2-201ENST00000619492 2400 ntBASIC17.35■□□□□ 0.37
TOP1P11387 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TOP1P11387 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TOP1P11387 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.35■□□□□ 0.37
TOP1P11387 MIR1247-201ENST00000408206 136 ntBASIC17.35■□□□□ 0.37
TOP1P11387 PUDPP3-201ENST00000445368 636 ntBASIC17.35■□□□□ 0.37
TOP1P11387 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TOP1P11387 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.35■□□□□ 0.37
TOP1P11387 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.35■□□□□ 0.37
TOP1P11387 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.35■□□□□ 0.37
TOP1P11387 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TOP1P11387 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TOP1P11387 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TOP1P11387 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.35■□□□□ 0.37
TOP1P11387 AL162426.1-201ENST00000624141 743 ntBASIC17.35■□□□□ 0.37
TOP1P11387 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC17.35■□□□□ 0.37
TOP1P11387 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TOP1P11387 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.35■□□□□ 0.37
TOP1P11387 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TOP1P11387 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TOP1P11387 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TOP1P11387 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.35■□□□□ 0.37
TOP1P11387 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.35■□□□□ 0.37
TOP1P11387 E2F3P2-201ENST00000447755 1422 ntBASIC17.35■□□□□ 0.37
TOP1P11387 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.35■□□□□ 0.37
TOP1P11387 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TOP1P11387 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TOP1P11387 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TOP1P11387 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TOP1P11387 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TOP1P11387 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TOP1P11387 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.35■□□□□ 0.37
TOP1P11387 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.34■□□□□ 0.37
TOP1P11387 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
TOP1P11387 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TOP1P11387 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TOP1P11387 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TOP1P11387 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.34■□□□□ 0.37
TOP1P11387 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TOP1P11387 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TOP1P11387 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TOP1P11387 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TOP1P11387 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TOP1P11387 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TOP1P11387 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TOP1P11387 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TOP1P11387 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.34■□□□□ 0.37
TOP1P11387 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TOP1P11387 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.34■□□□□ 0.37
TOP1P11387 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
TOP1P11387 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TOP1P11387 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TOP1P11387 GPAA1P2-201ENST00000417923 928 ntBASIC17.34■□□□□ 0.37
TOP1P11387 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.34■□□□□ 0.37
TOP1P11387 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.34■□□□□ 0.37
TOP1P11387 AC126915.1-201ENST00000522847 1038 ntBASIC17.34■□□□□ 0.37
TOP1P11387 AP001258.2-201ENST00000529891 490 ntBASIC17.34■□□□□ 0.37
TOP1P11387 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.34■□□□□ 0.37
TOP1P11387 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TOP1P11387 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.34■□□□□ 0.37
TOP1P11387 MIR6787-201ENST00000616675 61 ntBASIC17.34■□□□□ 0.37
TOP1P11387 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.34■□□□□ 0.37
TOP1P11387 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC17.34■□□□□ 0.37
TOP1P11387 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TOP1P11387 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TOP1P11387 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TOP1P11387 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.34■□□□□ 0.37
TOP1P11387 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.34■□□□□ 0.37
TOP1P11387 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms