Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
MT-ND1P03886 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.02□□□□□ -0.17
MT-ND1P03886 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
MT-ND1P03886 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
MT-ND1P03886 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
MT-ND1P03886 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
MT-ND1P03886 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
MT-ND1P03886 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MT-ND1P03886 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
MT-ND1P03886 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.01□□□□□ -0.17
MT-ND1P03886 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.01□□□□□ -0.17
MT-ND1P03886 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
MT-ND1P03886 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.01□□□□□ -0.17
MT-ND1P03886 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
MT-ND1P03886 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MT-ND1P03886 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MT-ND1P03886 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
MT-ND1P03886 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.01□□□□□ -0.17
MT-ND1P03886 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.01□□□□□ -0.17
MT-ND1P03886 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MT-ND1P03886 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.01□□□□□ -0.17
MT-ND1P03886 ZNF890P-202ENST00000530367 1156 ntBASIC14.01□□□□□ -0.17
MT-ND1P03886 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.01□□□□□ -0.17
MT-ND1P03886 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.01□□□□□ -0.17
MT-ND1P03886 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.01□□□□□ -0.17
MT-ND1P03886 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
MT-ND1P03886 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.01□□□□□ -0.17
MT-ND1P03886 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.01□□□□□ -0.17
MT-ND1P03886 AL158211.3-201ENST00000607385 239 ntBASIC14.01□□□□□ -0.17
MT-ND1P03886 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.01□□□□□ -0.17
MT-ND1P03886 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
MT-ND1P03886 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
MT-ND1P03886 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
MT-ND1P03886 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.01□□□□□ -0.17
MT-ND1P03886 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
MT-ND1P03886 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.01□□□□□ -0.17
MT-ND1P03886 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MT-ND1P03886 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.01□□□□□ -0.17
MT-ND1P03886 RN7SL832P-201ENST00000607781 1756 ntBASIC14.01□□□□□ -0.17
MT-ND1P03886 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
MT-ND1P03886 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
MT-ND1P03886 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
MT-ND1P03886 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MT-ND1P03886 TNN-202ENST00000621086 4234 ntTSL 5 BASIC14.01□□□□□ -0.17
MT-ND1P03886 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
MT-ND1P03886 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14□□□□□ -0.17
MT-ND1P03886 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14□□□□□ -0.17
MT-ND1P03886 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
MT-ND1P03886 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14□□□□□ -0.17
MT-ND1P03886 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14□□□□□ -0.17
MT-ND1P03886 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14□□□□□ -0.17
MT-ND1P03886 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
MT-ND1P03886 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
MT-ND1P03886 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14□□□□□ -0.17
MT-ND1P03886 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14□□□□□ -0.17
MT-ND1P03886 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14□□□□□ -0.17
MT-ND1P03886 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14□□□□□ -0.17
MT-ND1P03886 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 AC044860.1-202ENST00000559481 777 ntBASIC14□□□□□ -0.17
MT-ND1P03886 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14□□□□□ -0.17
MT-ND1P03886 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14□□□□□ -0.17
MT-ND1P03886 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14□□□□□ -0.17
MT-ND1P03886 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14□□□□□ -0.17
MT-ND1P03886 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14□□□□□ -0.17
MT-ND1P03886 AL691403.2-201ENST00000618460 490 ntBASIC14□□□□□ -0.17
MT-ND1P03886 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
MT-ND1P03886 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
MT-ND1P03886 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14□□□□□ -0.17
MT-ND1P03886 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14□□□□□ -0.17
MT-ND1P03886 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14□□□□□ -0.17
MT-ND1P03886 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14□□□□□ -0.17
MT-ND1P03886 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
MT-ND1P03886 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14□□□□□ -0.17
MT-ND1P03886 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14□□□□□ -0.17
MT-ND1P03886 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms