Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.24□□□□□ -0.29
APOA1P02647 AC093458.2-201ENST00000623150 629 ntBASIC13.24□□□□□ -0.29
APOA1P02647 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.24□□□□□ -0.29
APOA1P02647 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
APOA1P02647 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
APOA1P02647 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
APOA1P02647 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
APOA1P02647 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
APOA1P02647 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.24□□□□□ -0.29
APOA1P02647 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
APOA1P02647 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.24□□□□□ -0.29
APOA1P02647 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
APOA1P02647 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.23□□□□□ -0.29
APOA1P02647 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.23□□□□□ -0.29
APOA1P02647 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC13.23□□□□□ -0.29
APOA1P02647 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
APOA1P02647 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.23□□□□□ -0.29
APOA1P02647 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
APOA1P02647 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.23□□□□□ -0.29
APOA1P02647 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
APOA1P02647 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.23□□□□□ -0.29
APOA1P02647 AC142381.1-201ENST00000426099 345 ntBASIC13.23□□□□□ -0.29
APOA1P02647 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.23□□□□□ -0.29
APOA1P02647 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.23□□□□□ -0.29
APOA1P02647 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.23□□□□□ -0.29
APOA1P02647 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.23□□□□□ -0.29
APOA1P02647 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.23□□□□□ -0.29
APOA1P02647 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.23□□□□□ -0.29
APOA1P02647 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.23□□□□□ -0.29
APOA1P02647 IFNL4P1-201ENST00000607083 540 ntBASIC13.23□□□□□ -0.29
APOA1P02647 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.23□□□□□ -0.29
APOA1P02647 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
APOA1P02647 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
APOA1P02647 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
APOA1P02647 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.23□□□□□ -0.29
APOA1P02647 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
APOA1P02647 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
APOA1P02647 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOA1P02647 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
APOA1P02647 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.22□□□□□ -0.29
APOA1P02647 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOA1P02647 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.22□□□□□ -0.29
APOA1P02647 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOA1P02647 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOA1P02647 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOA1P02647 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOA1P02647 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOA1P02647 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOA1P02647 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOA1P02647 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
APOA1P02647 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
APOA1P02647 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
APOA1P02647 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
APOA1P02647 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
APOA1P02647 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOA1P02647 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOA1P02647 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
APOA1P02647 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms