Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 CSF2RBP1-201ENST00000447905 391 ntBASIC13.59□□□□□ -0.23
NKX2-2O95096 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-2O95096 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.59□□□□□ -0.23
NKX2-2O95096 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.59□□□□□ -0.23
NKX2-2O95096 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.59□□□□□ -0.23
NKX2-2O95096 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.59□□□□□ -0.23
NKX2-2O95096 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-2O95096 HILS1-202ENST00000545329 423 ntBASIC13.59□□□□□ -0.23
NKX2-2O95096 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.59□□□□□ -0.23
NKX2-2O95096 AP005482.1-201ENST00000563722 1273 ntBASIC13.59□□□□□ -0.23
NKX2-2O95096 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-2O95096 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.59□□□□□ -0.23
NKX2-2O95096 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-2O95096 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-2O95096 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.59□□□□□ -0.23
NKX2-2O95096 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.59□□□□□ -0.23
NKX2-2O95096 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-2O95096 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.59□□□□□ -0.23
NKX2-2O95096 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-2O95096 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-2O95096 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.59□□□□□ -0.23
NKX2-2O95096 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
NKX2-2O95096 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-2O95096 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-2O95096 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-2O95096 AC126755.1-201ENST00000525846 6405 ntBASIC13.59□□□□□ -0.23
NKX2-2O95096 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-2O95096 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
NKX2-2O95096 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.59□□□□□ -0.23
NKX2-2O95096 AL023775.1-201ENST00000454907 1746 ntBASIC13.59□□□□□ -0.23
NKX2-2O95096 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-2O95096 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
NKX2-2O95096 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
NKX2-2O95096 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
NKX2-2O95096 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NKX2-2O95096 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
NKX2-2O95096 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
NKX2-2O95096 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
NKX2-2O95096 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.58□□□□□ -0.23
NKX2-2O95096 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.58□□□□□ -0.24
NKX2-2O95096 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
NKX2-2O95096 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
NKX2-2O95096 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
NKX2-2O95096 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
NKX2-2O95096 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
NKX2-2O95096 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.58□□□□□ -0.24
NKX2-2O95096 AC099336.1-201ENST00000417053 1171 ntBASIC13.58□□□□□ -0.24
NKX2-2O95096 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.58□□□□□ -0.24
NKX2-2O95096 HLA-V-201ENST00000429037 534 ntBASIC13.58□□□□□ -0.24
NKX2-2O95096 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 AC022210.1-201ENST00000449856 793 ntBASIC13.58□□□□□ -0.24
NKX2-2O95096 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.58□□□□□ -0.24
NKX2-2O95096 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.58□□□□□ -0.24
NKX2-2O95096 AC119751.2-201ENST00000504529 210 ntBASIC13.58□□□□□ -0.24
NKX2-2O95096 AC100850.1-201ENST00000506768 649 ntBASIC13.58□□□□□ -0.24
NKX2-2O95096 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.58□□□□□ -0.24
NKX2-2O95096 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
NKX2-2O95096 DUX4L45-201ENST00000566406 1057 ntBASIC13.58□□□□□ -0.24
NKX2-2O95096 DUX4L46-201ENST00000566845 751 ntBASIC13.58□□□□□ -0.24
NKX2-2O95096 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.58□□□□□ -0.24
NKX2-2O95096 AC132192.2-201ENST00000596206 1147 ntBASIC13.58□□□□□ -0.24
NKX2-2O95096 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
NKX2-2O95096 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
NKX2-2O95096 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
NKX2-2O95096 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
NKX2-2O95096 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-2O95096 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
NKX2-2O95096 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
NKX2-2O95096 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX2-2O95096 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX2-2O95096 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX2-2O95096 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX2-2O95096 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.57□□□□□ -0.24
NKX2-2O95096 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.57□□□□□ -0.24
NKX2-2O95096 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms