Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.85□□□□□ -0.35
UPK1BO75841 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
UPK1BO75841 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.85□□□□□ -0.35
UPK1BO75841 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
UPK1BO75841 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
UPK1BO75841 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC12.85□□□□□ -0.35
UPK1BO75841 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
UPK1BO75841 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
UPK1BO75841 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.85□□□□□ -0.35
UPK1BO75841 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.85□□□□□ -0.35
UPK1BO75841 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.85□□□□□ -0.35
UPK1BO75841 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 AC087499.1-201ENST00000418141 1075 ntBASIC12.85□□□□□ -0.35
UPK1BO75841 AC140658.5-201ENST00000438532 169 ntBASIC12.85□□□□□ -0.35
UPK1BO75841 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC12.85□□□□□ -0.35
UPK1BO75841 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC12.85□□□□□ -0.35
UPK1BO75841 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
UPK1BO75841 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC12.85□□□□□ -0.35
UPK1BO75841 PNMT-203ENST00000581428 677 ntTSL 2 BASIC12.85□□□□□ -0.35
UPK1BO75841 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
UPK1BO75841 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.85□□□□□ -0.35
UPK1BO75841 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC12.85□□□□□ -0.35
UPK1BO75841 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.85□□□□□ -0.35
UPK1BO75841 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.85□□□□□ -0.35
UPK1BO75841 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.85□□□□□ -0.35
UPK1BO75841 MIR1199-201ENST00000621445 119 ntBASIC12.85□□□□□ -0.35
UPK1BO75841 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.85□□□□□ -0.35
UPK1BO75841 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.85□□□□□ -0.35
UPK1BO75841 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
UPK1BO75841 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
UPK1BO75841 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
UPK1BO75841 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.85□□□□□ -0.35
UPK1BO75841 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
UPK1BO75841 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
UPK1BO75841 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
UPK1BO75841 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
UPK1BO75841 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
UPK1BO75841 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
UPK1BO75841 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
UPK1BO75841 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 AC004623.1-201ENST00000624592 2127 ntBASIC12.85□□□□□ -0.35
UPK1BO75841 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.85□□□□□ -0.35
UPK1BO75841 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UPK1BO75841 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
UPK1BO75841 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UPK1BO75841 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UPK1BO75841 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UPK1BO75841 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UPK1BO75841 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UPK1BO75841 AL645937.6-201ENST00000641122 3727 ntBASIC12.84□□□□□ -0.35
UPK1BO75841 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UPK1BO75841 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UPK1BO75841 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC12.84□□□□□ -0.35
UPK1BO75841 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
UPK1BO75841 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
UPK1BO75841 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.84□□□□□ -0.35
UPK1BO75841 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UPK1BO75841 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UPK1BO75841 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
UPK1BO75841 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.84□□□□□ -0.35
UPK1BO75841 FAM220BP-201ENST00000377689 816 ntBASIC12.84□□□□□ -0.35
UPK1BO75841 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UPK1BO75841 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.84□□□□□ -0.35
UPK1BO75841 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.84□□□□□ -0.35
UPK1BO75841 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.84□□□□□ -0.35
UPK1BO75841 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms