Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 AC026954.1-201ENST00000429771 1293 ntBASIC13.17□□□□□ -0.3
TRAF3IP2O43734 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 CNN2P10-201ENST00000443067 918 ntBASIC13.17□□□□□ -0.3
TRAF3IP2O43734 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 ACA64.2-201ENST00000459014 129 ntBASIC13.17□□□□□ -0.3
TRAF3IP2O43734 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 AL358472.3-201ENST00000608147 415 ntBASIC13.17□□□□□ -0.3
TRAF3IP2O43734 ZACNP1-201ENST00000612259 710 ntBASIC13.17□□□□□ -0.3
TRAF3IP2O43734 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 AC006504.5-208ENST00000588784 2401 ntBASIC13.16□□□□□ -0.3
TRAF3IP2O43734 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 MIR1909-201ENST00000411312 80 ntBASIC13.16□□□□□ -0.3
TRAF3IP2O43734 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 AC079316.1-201ENST00000548397 411 ntBASIC13.16□□□□□ -0.3
TRAF3IP2O43734 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 PPY2P-201ENST00000582808 702 ntBASIC13.16□□□□□ -0.3
TRAF3IP2O43734 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 AC008687.7-202ENST00000637404 953 ntBASIC13.16□□□□□ -0.3
TRAF3IP2O43734 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms