Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATP2A1O14983 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ATP2A1O14983 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP2A1O14983 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A1O14983 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A1O14983 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A1O14983 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A1O14983 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP2A1O14983 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A1O14983 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ATP2A1O14983 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ATP2A1O14983 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP2A1O14983 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.83■□□□□ 0.28
ATP2A1O14983 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.83■□□□□ 0.28
ATP2A1O14983 MPRIPP1-201ENST00000452433 1089 ntBASIC16.83■□□□□ 0.28
ATP2A1O14983 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.83■□□□□ 0.28
ATP2A1O14983 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.83■□□□□ 0.28
ATP2A1O14983 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP2A1O14983 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A1O14983 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.83■□□□□ 0.28
ATP2A1O14983 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.83■□□□□ 0.28
ATP2A1O14983 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A1O14983 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.83■□□□□ 0.28
ATP2A1O14983 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.83■□□□□ 0.28
ATP2A1O14983 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A1O14983 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ATP2A1O14983 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP2A1O14983 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A1O14983 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.83■□□□□ 0.28
ATP2A1O14983 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.83■□□□□ 0.28
ATP2A1O14983 AC018635.2-201ENST00000608625 364 ntBASIC16.83■□□□□ 0.28
ATP2A1O14983 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.83■□□□□ 0.28
ATP2A1O14983 TBC1D3J-201ENST00000620719 1426 ntBASIC16.83■□□□□ 0.28
ATP2A1O14983 AC018629.1-201ENST00000623381 1736 ntBASIC16.83■□□□□ 0.28
ATP2A1O14983 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.83■□□□□ 0.28
ATP2A1O14983 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.83■□□□□ 0.28
ATP2A1O14983 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A1O14983 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A1O14983 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A1O14983 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP2A1O14983 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP2A1O14983 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
ATP2A1O14983 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP2A1O14983 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP2A1O14983 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
ATP2A1O14983 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 LINC01165-201ENST00000445190 1623 ntBASIC16.82■□□□□ 0.28
ATP2A1O14983 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP2A1O14983 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 FAM90A2P-201ENST00000511144 1395 ntBASIC16.82■□□□□ 0.28
ATP2A1O14983 FAM90A25P-201ENST00000528404 1395 ntBASIC16.82■□□□□ 0.28
ATP2A1O14983 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP2A1O14983 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP2A1O14983 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP2A1O14983 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
ATP2A1O14983 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP2A1O14983 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.82■□□□□ 0.28
ATP2A1O14983 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP2A1O14983 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP2A1O14983 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP2A1O14983 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP2A1O14983 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATP2A1O14983 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 CICP23-201ENST00000605013 2741 ntBASIC16.82■□□□□ 0.28
ATP2A1O14983 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A1O14983 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A1O14983 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP2A1O14983 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A1O14983 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A1O14983 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A1O14983 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A1O14983 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ATP2A1O14983 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A1O14983 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A1O14983 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A1O14983 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP2A1O14983 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms