Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD2O14647 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHD2O14647 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHD2O14647 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHD2O14647 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD2O14647 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD2O14647 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC19.75■□□□□ 0.75
CHD2O14647 GOLGA2P8-201ENST00000505201 779 ntBASIC19.75■□□□□ 0.75
CHD2O14647 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC19.75■□□□□ 0.75
CHD2O14647 MIR2278-201ENST00000516344 96 ntBASIC19.75■□□□□ 0.75
CHD2O14647 BMF-206ENST00000558774 671 ntTSL 3 BASIC19.75■□□□□ 0.75
CHD2O14647 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.75■□□□□ 0.75
CHD2O14647 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD2O14647 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHD2O14647 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD2O14647 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD2O14647 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD2O14647 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC19.75■□□□□ 0.75
CHD2O14647 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD2O14647 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
CHD2O14647 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHD2O14647 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHD2O14647 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
CHD2O14647 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.74■□□□□ 0.75
CHD2O14647 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
CHD2O14647 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
CHD2O14647 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC19.74■□□□□ 0.75
CHD2O14647 RPSAP12-201ENST00000435879 888 ntBASIC19.74■□□□□ 0.75
CHD2O14647 RN7SL578P-201ENST00000477781 283 ntBASIC19.74■□□□□ 0.75
CHD2O14647 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHD2O14647 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC19.74■□□□□ 0.75
CHD2O14647 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHD2O14647 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.74■□□□□ 0.75
CHD2O14647 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC19.74■□□□□ 0.75
CHD2O14647 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD2O14647 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD2O14647 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.74■□□□□ 0.75
CHD2O14647 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD2O14647 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHD2O14647 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.74■□□□□ 0.75
CHD2O14647 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.74■□□□□ 0.75
CHD2O14647 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD2O14647 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CHD2O14647 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CHD2O14647 RNA5SP491-201ENST00000362936 118 ntBASIC19.74■□□□□ 0.75
CHD2O14647 U73169.1-201ENST00000395152 367 ntBASIC19.74■□□□□ 0.75
CHD2O14647 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC19.74■□□□□ 0.75
CHD2O14647 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC19.74■□□□□ 0.75
CHD2O14647 AC091304.3-201ENST00000566500 716 ntBASIC19.74■□□□□ 0.75
CHD2O14647 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC19.74■□□□□ 0.75
CHD2O14647 CSTP2-201ENST00000610599 398 ntBASIC19.74■□□□□ 0.75
CHD2O14647 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC19.74■□□□□ 0.75
CHD2O14647 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD2O14647 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.73■□□□□ 0.75
CHD2O14647 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CHD2O14647 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD2O14647 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD2O14647 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD2O14647 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC19.73■□□□□ 0.75
CHD2O14647 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD2O14647 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC19.73■□□□□ 0.75
CHD2O14647 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
CHD2O14647 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD2O14647 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD2O14647 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHD2O14647 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CHD2O14647 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD2O14647 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.73■□□□□ 0.75
CHD2O14647 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.73■□□□□ 0.75
CHD2O14647 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHD2O14647 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD2O14647 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC19.73■□□□□ 0.75
CHD2O14647 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC19.73■□□□□ 0.75
CHD2O14647 AC108724.1-201ENST00000481669 352 ntBASIC19.73■□□□□ 0.75
CHD2O14647 TBC1D3P6-201ENST00000505954 962 ntBASIC19.73■□□□□ 0.75
CHD2O14647 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC19.73■□□□□ 0.75
CHD2O14647 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC19.73■□□□□ 0.75
CHD2O14647 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
CHD2O14647 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHD2O14647 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHD2O14647 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD2O14647 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD2O14647 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHD2O14647 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHD2O14647 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHD2O14647 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD2O14647 AC015909.5-201ENST00000624336 2266 ntBASIC19.73■□□□□ 0.75
CHD2O14647 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHD2O14647 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD2O14647 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHD2O14647 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.72■□□□□ 0.75
CHD2O14647 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD2O14647 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC19.72■□□□□ 0.75
CHD2O14647 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHD2O14647 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
CHD2O14647 FAU-201ENST00000279259 461 ntTSL 2 BASIC19.72■□□□□ 0.75
CHD2O14647 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD2O14647 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CHD2O14647 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHD2O14647 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms