Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 AC004923.3-201ENST00000527532 355 ntBASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 AC005865.2-202ENST00000635814 725 ntBASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 AL139384.1-201ENST00000612143 3047 ntBASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 CICP13-201ENST00000422015 2789 ntBASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 PCDH8P1-201ENST00000428983 2773 ntBASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 HLA-DMA-202ENST00000395303 1007 ntBASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 AC025186.1-201ENST00000478174 870 ntBASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 ALG1L7P-201ENST00000502317 768 ntBASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 MIR4640-201ENST00000581824 90 ntBASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 OR3A1-202ENST00000615105 966 ntBASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 AL050341.2-201ENST00000567508 1541 ntBASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM88BA6NKF7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 AC139712.1-201ENST00000378256 1875 ntBASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 HDGF-202ENST00000368206 960 ntTSL 5 BASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 KRT18P44-201ENST00000416086 1285 ntBASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 SAP18P2-201ENST00000434334 459 ntBASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 AC120498.5-201ENST00000561757 299 ntBASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 MIR4265-201ENST00000582152 99 ntBASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 AC132812.1-201ENST00000583145 892 ntBASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 MIR6893-201ENST00000613458 69 ntBASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 AC099398.1-201ENST00000567919 2776 ntBASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM88BA6NKF7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms