Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRFN1Q9P244 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRFN1Q9P244 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRFN1Q9P244 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRFN1Q9P244 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRFN1Q9P244 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.59□□□□□ -0.23
LRFN1Q9P244 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LRFN1Q9P244 AC022532.1-201ENST00000624563 1728 ntBASIC13.59□□□□□ -0.23
LRFN1Q9P244 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRFN1Q9P244 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRFN1Q9P244 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LRFN1Q9P244 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
LRFN1Q9P244 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
LRFN1Q9P244 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.23
LRFN1Q9P244 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
LRFN1Q9P244 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LRFN1Q9P244 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LRFN1Q9P244 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
LRFN1Q9P244 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
LRFN1Q9P244 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.58□□□□□ -0.24
LRFN1Q9P244 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRFN1Q9P244 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LRFN1Q9P244 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRFN1Q9P244 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRFN1Q9P244 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LRFN1Q9P244 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.58□□□□□ -0.24
LRFN1Q9P244 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.58□□□□□ -0.24
LRFN1Q9P244 AC126177.1-201ENST00000547829 2218 ntBASIC13.58□□□□□ -0.24
LRFN1Q9P244 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
LRFN1Q9P244 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRFN1Q9P244 AL662890.1-201ENST00000396818 632 ntBASIC13.58□□□□□ -0.24
LRFN1Q9P244 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.58□□□□□ -0.24
LRFN1Q9P244 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.58□□□□□ -0.24
LRFN1Q9P244 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.58□□□□□ -0.24
LRFN1Q9P244 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.58□□□□□ -0.24
LRFN1Q9P244 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.58□□□□□ -0.24
LRFN1Q9P244 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.58□□□□□ -0.24
LRFN1Q9P244 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.58□□□□□ -0.24
LRFN1Q9P244 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.58□□□□□ -0.24
LRFN1Q9P244 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.58□□□□□ -0.24
LRFN1Q9P244 AC009884.2-201ENST00000603110 324 ntBASIC13.58□□□□□ -0.24
LRFN1Q9P244 AC090164.2-201ENST00000611487 516 ntBASIC13.58□□□□□ -0.24
LRFN1Q9P244 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.58□□□□□ -0.24
LRFN1Q9P244 AC027601.3-201ENST00000622907 509 ntBASIC13.58□□□□□ -0.24
LRFN1Q9P244 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.58□□□□□ -0.24
LRFN1Q9P244 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.58□□□□□ -0.24
LRFN1Q9P244 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRFN1Q9P244 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRFN1Q9P244 AC244394.1-201ENST00000435000 1665 ntBASIC13.58□□□□□ -0.24
LRFN1Q9P244 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRFN1Q9P244 AC091951.1-201ENST00000512854 2465 ntBASIC13.58□□□□□ -0.24
LRFN1Q9P244 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.58□□□□□ -0.24
LRFN1Q9P244 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
LRFN1Q9P244 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRFN1Q9P244 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LRFN1Q9P244 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
LRFN1Q9P244 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRFN1Q9P244 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.58□□□□□ -0.24
LRFN1Q9P244 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LRFN1Q9P244 AL008718.2-201ENST00000609206 1313 ntBASIC13.58□□□□□ -0.24
LRFN1Q9P244 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.58□□□□□ -0.24
LRFN1Q9P244 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRFN1Q9P244 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRFN1Q9P244 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
LRFN1Q9P244 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
LRFN1Q9P244 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRFN1Q9P244 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRFN1Q9P244 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRFN1Q9P244 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRFN1Q9P244 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRFN1Q9P244 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRFN1Q9P244 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRFN1Q9P244 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRFN1Q9P244 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRFN1Q9P244 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRFN1Q9P244 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRFN1Q9P244 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRFN1Q9P244 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRFN1Q9P244 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRFN1Q9P244 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRFN1Q9P244 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 CYP46A4P-201ENST00000414953 267 ntBASIC13.57□□□□□ -0.24
LRFN1Q9P244 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 Z97180.1-201ENST00000445173 988 ntBASIC13.57□□□□□ -0.24
LRFN1Q9P244 PUDPP3-201ENST00000445368 636 ntBASIC13.57□□□□□ -0.24
LRFN1Q9P244 AL035414.1-201ENST00000451327 857 ntBASIC13.57□□□□□ -0.24
LRFN1Q9P244 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 RPL18P13-201ENST00000478088 569 ntBASIC13.57□□□□□ -0.24
LRFN1Q9P244 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.57□□□□□ -0.24
LRFN1Q9P244 AC022217.1-201ENST00000521069 738 ntBASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms