Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP6V0A4Q9HBG4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP6V0A4Q9HBG4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP6V0A4Q9HBG4 AC092135.3-201ENST00000624151 1846 ntBASIC16.45■□□□□ 0.22
ATP6V0A4Q9HBG4 MRPL37P1-201ENST00000592451 1337 ntBASIC16.45■□□□□ 0.22
ATP6V0A4Q9HBG4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 HIST2H2BC-201ENST00000498492 580 ntBASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 RHOQP1-201ENST00000555758 579 ntBASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 FGD5P1-202ENST00000614866 2498 ntBASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 CICP24-201ENST00000605464 2705 ntBASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 E2F3P2-201ENST00000447755 1422 ntBASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 AC018529.2-202ENST00000611482 3087 ntBASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A4Q9HBG4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 DUX4L46-201ENST00000566845 751 ntBASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 AC009955.4-201ENST00000597192 544 ntBASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A4Q9HBG4 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 AC013726.1-201ENST00000563747 2285 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms