Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EFCC1Q9HA90 AC020910.5-201ENST00000623668 1865 ntBASIC17.23■□□□□ 0.35
EFCC1Q9HA90 AC079781.5-202ENST00000641784 3743 ntBASIC17.23■□□□□ 0.35
EFCC1Q9HA90 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
EFCC1Q9HA90 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EFCC1Q9HA90 OR2K2-202ENST00000374428 1038 ntBASIC17.23■□□□□ 0.35
EFCC1Q9HA90 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC17.23■□□□□ 0.35
EFCC1Q9HA90 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC17.23■□□□□ 0.35
EFCC1Q9HA90 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EFCC1Q9HA90 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EFCC1Q9HA90 AL592076.1-201ENST00000424448 303 ntBASIC17.23■□□□□ 0.35
EFCC1Q9HA90 IDS-203ENST00000428056 1213 ntTSL 2 BASIC17.23■□□□□ 0.35
EFCC1Q9HA90 RPL8P2-201ENST00000430538 502 ntBASIC17.23■□□□□ 0.35
EFCC1Q9HA90 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC17.23■□□□□ 0.35
EFCC1Q9HA90 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.23■□□□□ 0.35
EFCC1Q9HA90 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.23■□□□□ 0.35
EFCC1Q9HA90 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC17.23■□□□□ 0.35
EFCC1Q9HA90 DUX4L46-201ENST00000566845 751 ntBASIC17.23■□□□□ 0.35
EFCC1Q9HA90 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.23■□□□□ 0.35
EFCC1Q9HA90 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
EFCC1Q9HA90 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.23■□□□□ 0.35
EFCC1Q9HA90 AC008805.1-201ENST00000590892 364 ntBASIC17.23■□□□□ 0.35
EFCC1Q9HA90 AC148477.9-201ENST00000623974 539 ntBASIC17.23■□□□□ 0.35
EFCC1Q9HA90 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
EFCC1Q9HA90 CAP2P1-201ENST00000557743 1390 ntBASIC17.23■□□□□ 0.35
EFCC1Q9HA90 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
EFCC1Q9HA90 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EFCC1Q9HA90 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.23■□□□□ 0.35
EFCC1Q9HA90 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EFCC1Q9HA90 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
EFCC1Q9HA90 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.23■□□□□ 0.35
EFCC1Q9HA90 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EFCC1Q9HA90 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.23■□□□□ 0.35
EFCC1Q9HA90 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EFCC1Q9HA90 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.23■□□□□ 0.35
EFCC1Q9HA90 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 AC026803.1-201ENST00000569130 274 ntBASIC17.22■□□□□ 0.35
EFCC1Q9HA90 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 AC007881.3-201ENST00000608897 607 ntBASIC17.22■□□□□ 0.35
EFCC1Q9HA90 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 AL137783.1-201ENST00000623494 1896 ntBASIC17.22■□□□□ 0.35
EFCC1Q9HA90 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
EFCC1Q9HA90 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EFCC1Q9HA90 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
EFCC1Q9HA90 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
EFCC1Q9HA90 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC17.21■□□□□ 0.35
EFCC1Q9HA90 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EFCC1Q9HA90 SHC1P1-201ENST00000425230 1745 ntBASIC17.21■□□□□ 0.35
EFCC1Q9HA90 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.21■□□□□ 0.35
EFCC1Q9HA90 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EFCC1Q9HA90 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.21■□□□□ 0.35
EFCC1Q9HA90 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
EFCC1Q9HA90 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.21■□□□□ 0.35
EFCC1Q9HA90 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
EFCC1Q9HA90 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
EFCC1Q9HA90 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.21■□□□□ 0.35
EFCC1Q9HA90 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EFCC1Q9HA90 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EFCC1Q9HA90 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.21■□□□□ 0.35
EFCC1Q9HA90 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EFCC1Q9HA90 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
EFCC1Q9HA90 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.21■□□□□ 0.35
EFCC1Q9HA90 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC17.21■□□□□ 0.35
EFCC1Q9HA90 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.21■□□□□ 0.35
EFCC1Q9HA90 AC008723.1-201ENST00000506922 207 ntBASIC17.21■□□□□ 0.35
EFCC1Q9HA90 NSD1-211ENST00000511258 809 ntTSL 3 BASIC17.21■□□□□ 0.35
EFCC1Q9HA90 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.21■□□□□ 0.35
EFCC1Q9HA90 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms