Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J2Q9GZM3 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.75□□□□□ -0.21
POLR2J2Q9GZM3 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
POLR2J2Q9GZM3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
POLR2J2Q9GZM3 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J2Q9GZM3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
POLR2J2Q9GZM3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J2Q9GZM3 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J2Q9GZM3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J2Q9GZM3 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
POLR2J2Q9GZM3 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
POLR2J2Q9GZM3 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
POLR2J2Q9GZM3 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 SLC7A15P-201ENST00000424028 1363 ntBASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 AC124283.3-201ENST00000570869 594 ntBASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 AP005019.2-201ENST00000615104 511 ntBASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.74□□□□□ -0.21
POLR2J2Q9GZM3 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 AL391825.1-201ENST00000457671 1364 ntBASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 RNU1-114P-201ENST00000365297 166 ntBASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 ACTBP8-201ENST00000403258 1108 ntBASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 SPDYE22P-201ENST00000582158 798 ntBASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 AC004790.1-201ENST00000612686 536 ntBASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 AC009118.2-201ENST00000613275 655 ntBASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.73□□□□□ -0.21
POLR2J2Q9GZM3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms