Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 AC005586.2-201ENST00000563946 837 ntBASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 AC006158.1-201ENST00000610661 249 ntBASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 AC073592.2-201ENST00000623062 780 ntBASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 AL591122.2-201ENST00000624125 1853 ntBASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH11YQ9BZA8 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 AC024293.1-201ENST00000467930 498 ntBASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH11YQ9BZA8 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 SAT1-201ENST00000379251 801 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 SAT1-202ENST00000379253 909 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 SAT1-203ENST00000379254 868 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 RN7SL396P-201ENST00000471086 295 ntBASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 NDUFB10P1-201ENST00000567319 521 ntBASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 NAMA-206ENST00000605377 509 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 AL451007.2-201ENST00000632004 563 ntBASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 HYMAI-201ENST00000635591 3347 ntBASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 AC091951.1-201ENST00000512854 2465 ntBASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 LINC00554-201ENST00000564841 3011 ntBASIC18.79■□□□□ 0.6
PCDH11YQ9BZA8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms