Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 AOC4P-203ENST00000566825 2289 ntBASIC13.98□□□□□ -0.17
NR1H4Q96RI1 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 CSPG4P11-201ENST00000560634 4910 ntBASIC13.98□□□□□ -0.17
NR1H4Q96RI1 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 AC125807.2-201ENST00000513358 3514 ntBASIC13.98□□□□□ -0.17
NR1H4Q96RI1 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 AC110048.1-201ENST00000604293 2157 ntBASIC13.98□□□□□ -0.17
NR1H4Q96RI1 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 FAM185BP-201ENST00000443595 716 ntBASIC13.97□□□□□ -0.17
NR1H4Q96RI1 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 AC108751.1-201ENST00000490852 363 ntBASIC13.97□□□□□ -0.17
NR1H4Q96RI1 CXCL1P1-201ENST00000502804 216 ntBASIC13.97□□□□□ -0.17
NR1H4Q96RI1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 RN7SL510P-201ENST00000581311 263 ntBASIC13.97□□□□□ -0.17
NR1H4Q96RI1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 AC015819.3-201ENST00000624305 2674 ntBASIC13.97□□□□□ -0.17
NR1H4Q96RI1 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H4Q96RI1 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 CYP4F24P-201ENST00000586049 1580 ntBASIC13.96□□□□□ -0.17
NR1H4Q96RI1 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 AL157996.1-201ENST00000624684 2299 ntBASIC13.96□□□□□ -0.17
NR1H4Q96RI1 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 AC004870.1-201ENST00000315132 882 ntBASIC13.96□□□□□ -0.17
NR1H4Q96RI1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms