Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.72□□□□□ -0.21
HPS1Q92902 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HPS1Q92902 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.72□□□□□ -0.21
HPS1Q92902 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.72□□□□□ -0.21
HPS1Q92902 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.72□□□□□ -0.21
HPS1Q92902 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.72□□□□□ -0.21
HPS1Q92902 UGT1A2P-201ENST00000454886 866 ntBASIC13.72□□□□□ -0.21
HPS1Q92902 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.72□□□□□ -0.21
HPS1Q92902 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC13.72□□□□□ -0.21
HPS1Q92902 AC004890.2-204ENST00000481968 304 ntBASIC13.72□□□□□ -0.21
HPS1Q92902 AC005225.4-201ENST00000557330 545 ntBASIC13.72□□□□□ -0.21
HPS1Q92902 HMGB1P8-201ENST00000558211 949 ntBASIC13.72□□□□□ -0.21
HPS1Q92902 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.72□□□□□ -0.21
HPS1Q92902 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.72□□□□□ -0.21
HPS1Q92902 AC108673.2-201ENST00000608909 565 ntBASIC13.72□□□□□ -0.21
HPS1Q92902 AL590560.3-201ENST00000623350 461 ntBASIC13.72□□□□□ -0.21
HPS1Q92902 AL356094.1-201ENST00000624663 1212 ntBASIC13.72□□□□□ -0.21
HPS1Q92902 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.72□□□□□ -0.21
HPS1Q92902 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.72□□□□□ -0.21
HPS1Q92902 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.72□□□□□ -0.21
HPS1Q92902 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
HPS1Q92902 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.72□□□□□ -0.21
HPS1Q92902 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HPS1Q92902 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HPS1Q92902 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HPS1Q92902 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HPS1Q92902 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.71□□□□□ -0.21
HPS1Q92902 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HPS1Q92902 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.71□□□□□ -0.21
HPS1Q92902 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HPS1Q92902 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
HPS1Q92902 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
HPS1Q92902 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HPS1Q92902 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HPS1Q92902 AC106818.1-201ENST00000623223 3242 ntBASIC13.71□□□□□ -0.21
HPS1Q92902 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.71□□□□□ -0.21
HPS1Q92902 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HPS1Q92902 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HPS1Q92902 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HPS1Q92902 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.71□□□□□ -0.21
HPS1Q92902 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.71□□□□□ -0.21
HPS1Q92902 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.71□□□□□ -0.21
HPS1Q92902 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC13.71□□□□□ -0.21
HPS1Q92902 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.71□□□□□ -0.21
HPS1Q92902 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.71□□□□□ -0.21
HPS1Q92902 MIR583HG-201ENST00000507997 704 ntTSL 2 BASIC13.71□□□□□ -0.21
HPS1Q92902 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.71□□□□□ -0.21
HPS1Q92902 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.71□□□□□ -0.21
HPS1Q92902 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.71□□□□□ -0.21
HPS1Q92902 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.71□□□□□ -0.21
HPS1Q92902 AC012645.4-201ENST00000610691 1061 ntBASIC13.71□□□□□ -0.21
HPS1Q92902 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.71□□□□□ -0.21
HPS1Q92902 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HPS1Q92902 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.71□□□□□ -0.21
HPS1Q92902 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HPS1Q92902 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.71□□□□□ -0.21
HPS1Q92902 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HPS1Q92902 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HPS1Q92902 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HPS1Q92902 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.71□□□□□ -0.21
HPS1Q92902 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.71□□□□□ -0.21
HPS1Q92902 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.71□□□□□ -0.21
HPS1Q92902 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.71□□□□□ -0.22
HPS1Q92902 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
HPS1Q92902 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.71□□□□□ -0.22
HPS1Q92902 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.71□□□□□ -0.22
HPS1Q92902 AC100757.3-201ENST00000622361 1406 ntBASIC13.71□□□□□ -0.22
HPS1Q92902 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HPS1Q92902 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.71□□□□□ -0.22
HPS1Q92902 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HPS1Q92902 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HPS1Q92902 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
HPS1Q92902 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HPS1Q92902 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HPS1Q92902 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.7□□□□□ -0.22
HPS1Q92902 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.7□□□□□ -0.22
HPS1Q92902 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms