Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNED1Q8TER0 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SNED1Q8TER0 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SNED1Q8TER0 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
SNED1Q8TER0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNED1Q8TER0 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNED1Q8TER0 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNED1Q8TER0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNED1Q8TER0 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.58■□□□□ 0.4
SNED1Q8TER0 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNED1Q8TER0 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SNED1Q8TER0 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.57■□□□□ 0.4
SNED1Q8TER0 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNED1Q8TER0 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.57■□□□□ 0.4
SNED1Q8TER0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SNED1Q8TER0 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC17.57■□□□□ 0.4
SNED1Q8TER0 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNED1Q8TER0 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC17.57■□□□□ 0.4
SNED1Q8TER0 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
SNED1Q8TER0 MT2A-202ENST00000561491 581 ntTSL 2 BASIC17.57■□□□□ 0.4
SNED1Q8TER0 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC17.57■□□□□ 0.4
SNED1Q8TER0 PEBP1P2-201ENST00000603980 558 ntBASIC17.57■□□□□ 0.4
SNED1Q8TER0 CTBP2P8-201ENST00000422584 1330 ntBASIC17.57■□□□□ 0.4
SNED1Q8TER0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNED1Q8TER0 TEKT4P2-202ENST00000559466 1312 ntBASIC17.57■□□□□ 0.4
SNED1Q8TER0 FAM90A21P-201ENST00000510875 1396 ntBASIC17.57■□□□□ 0.4
SNED1Q8TER0 FAM90A15P-201ENST00000514465 1395 ntBASIC17.57■□□□□ 0.4
SNED1Q8TER0 FAM90A6P-201ENST00000515148 1394 ntBASIC17.57■□□□□ 0.4
SNED1Q8TER0 FAM90A16P-201ENST00000526662 1395 ntBASIC17.57■□□□□ 0.4
SNED1Q8TER0 FAM90A9P-201ENST00000527940 1395 ntBASIC17.57■□□□□ 0.4
SNED1Q8TER0 FAM90A5P-201ENST00000528738 1395 ntBASIC17.57■□□□□ 0.4
SNED1Q8TER0 FAM90A14P-201ENST00000530386 1395 ntBASIC17.57■□□□□ 0.4
SNED1Q8TER0 FAM90A13P-201ENST00000534703 1395 ntBASIC17.57■□□□□ 0.4
SNED1Q8TER0 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
SNED1Q8TER0 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SNED1Q8TER0 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC17.57■□□□□ 0.4
SNED1Q8TER0 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNED1Q8TER0 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNED1Q8TER0 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNED1Q8TER0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.57■□□□□ 0.4
SNED1Q8TER0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNED1Q8TER0 AGAP7P-201ENST00000582299 2062 ntBASIC17.57■□□□□ 0.4
SNED1Q8TER0 AGAP14-201ENST00000624701 2060 ntBASIC17.57■□□□□ 0.4
SNED1Q8TER0 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNED1Q8TER0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNED1Q8TER0 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNED1Q8TER0 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNED1Q8TER0 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNED1Q8TER0 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SNED1Q8TER0 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNED1Q8TER0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNED1Q8TER0 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNED1Q8TER0 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNED1Q8TER0 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNED1Q8TER0 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNED1Q8TER0 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNED1Q8TER0 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNED1Q8TER0 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC17.56■□□□□ 0.4
SNED1Q8TER0 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC17.56■□□□□ 0.4
SNED1Q8TER0 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNED1Q8TER0 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SNED1Q8TER0 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNED1Q8TER0 ACTG1P19-201ENST00000418987 1116 ntBASIC17.56■□□□□ 0.4
SNED1Q8TER0 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC17.56■□□□□ 0.4
SNED1Q8TER0 FAM86KP-201ENST00000509817 987 ntBASIC17.56■□□□□ 0.4
SNED1Q8TER0 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC17.56■□□□□ 0.4
SNED1Q8TER0 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC17.56■□□□□ 0.4
SNED1Q8TER0 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC17.56■□□□□ 0.4
SNED1Q8TER0 AC006483.2-201ENST00000609813 515 ntBASIC17.56■□□□□ 0.4
SNED1Q8TER0 AC018695.6-201ENST00000614011 534 ntBASIC17.56■□□□□ 0.4
SNED1Q8TER0 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC17.56■□□□□ 0.4
SNED1Q8TER0 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC17.56■□□□□ 0.4
SNED1Q8TER0 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNED1Q8TER0 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNED1Q8TER0 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SNED1Q8TER0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNED1Q8TER0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNED1Q8TER0 AC011270.2-201ENST00000624293 2550 ntBASIC17.56■□□□□ 0.4
SNED1Q8TER0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNED1Q8TER0 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.56■□□□□ 0.4
SNED1Q8TER0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNED1Q8TER0 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNED1Q8TER0 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNED1Q8TER0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SNED1Q8TER0 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNED1Q8TER0 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNED1Q8TER0 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNED1Q8TER0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNED1Q8TER0 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNED1Q8TER0 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNED1Q8TER0 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNED1Q8TER0 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNED1Q8TER0 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.56■□□□□ 0.4
SNED1Q8TER0 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNED1Q8TER0 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNED1Q8TER0 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC17.55■□□□□ 0.4
SNED1Q8TER0 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC17.55■□□□□ 0.4
SNED1Q8TER0 AC006529.1-201ENST00000459978 637 ntBASIC17.55■□□□□ 0.4
SNED1Q8TER0 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC17.55■□□□□ 0.4
SNED1Q8TER0 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms