Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC132812.1-201ENST00000583145 892 ntBASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 CICP23-201ENST00000605013 2741 ntBASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 MIR611-201ENST00000384869 67 ntBASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 HNRNPA3P6-201ENST00000472163 1006 ntBASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 SNRPD2P2-201ENST00000473818 333 ntBASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 AC005777.1-201ENST00000588332 187 ntBASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 AL512324.3-201ENST00000619383 882 ntBASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 RPL13AP3-202ENST00000494676 1473 ntBASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 JPT2-203ENST00000382711 894 ntTSL 4 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 CFL1P6-201ENST00000400899 494 ntBASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 RPSAP6-201ENST00000417882 882 ntBASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 IFNL3P1-201ENST00000595082 501 ntBASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 AC005865.2-202ENST00000635814 725 ntBASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 AL137077.2-201ENST00000635124 1608 ntBASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 DKKL1P1-201ENST00000400550 698 ntBASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 AL450487.2-201ENST00000615934 407 ntBASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
ALMS1Q8TCU4 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 AC026412.1-206ENST00000502273 206 ntBASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 AC147876.1-201ENST00000504408 322 ntBASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 C18orf15-201ENST00000623680 2534 ntBASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms