Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.49□□□□□ -0.09
LRRTM4Q86VH4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM4Q86VH4 MIR6720-201ENST00000611664 98 ntBASIC14.49□□□□□ -0.09
LRRTM4Q86VH4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
LRRTM4Q86VH4 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM4Q86VH4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
LRRTM4Q86VH4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM4Q86VH4 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.49□□□□□ -0.09
LRRTM4Q86VH4 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM4Q86VH4 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LRRTM4Q86VH4 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LRRTM4Q86VH4 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM4Q86VH4 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LRRTM4Q86VH4 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM4Q86VH4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM4Q86VH4 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM4Q86VH4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM4Q86VH4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
LRRTM4Q86VH4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM4Q86VH4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM4Q86VH4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LRRTM4Q86VH4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 AC020907.1-201ENST00000616460 1350 ntBASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 AL008718.2-201ENST00000609206 1313 ntBASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 RNMTL1P1-201ENST00000454103 560 ntBASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 SERPINA13P-202ENST00000478994 924 ntBASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 AC009884.2-201ENST00000603110 324 ntBASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRRTM4Q86VH4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 AL354702.1-201ENST00000442006 1960 ntBASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 MIR1247-201ENST00000408206 136 ntBASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 AC099548.2-209ENST00000480264 625 ntBASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 BNIP3P13-201ENST00000599968 566 ntBASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms