Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 BTBD6P1-201ENST00000412176 1267 ntBASIC14.2□□□□□ -0.14
RNF44Q7L0R7 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 ACTBP11-201ENST00000436287 1126 ntBASIC14.2□□□□□ -0.14
RNF44Q7L0R7 AC100850.1-201ENST00000506768 649 ntBASIC14.2□□□□□ -0.14
RNF44Q7L0R7 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 AC008825.2-201ENST00000603374 718 ntBASIC14.2□□□□□ -0.14
RNF44Q7L0R7 AL136301.1-201ENST00000615830 422 ntBASIC14.2□□□□□ -0.14
RNF44Q7L0R7 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 AC092135.3-201ENST00000624151 1846 ntBASIC14.2□□□□□ -0.14
RNF44Q7L0R7 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
RNF44Q7L0R7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 MRPL37P1-201ENST00000592451 1337 ntBASIC14.19□□□□□ -0.14
RNF44Q7L0R7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 SHC1P1-201ENST00000425230 1745 ntBASIC14.19□□□□□ -0.14
RNF44Q7L0R7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 BRWD1P1-201ENST00000401091 371 ntBASIC14.19□□□□□ -0.14
RNF44Q7L0R7 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.19□□□□□ -0.14
RNF44Q7L0R7 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 PUDPP3-201ENST00000445368 636 ntBASIC14.19□□□□□ -0.14
RNF44Q7L0R7 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 AC092658.1-201ENST00000505836 891 ntBASIC14.19□□□□□ -0.14
RNF44Q7L0R7 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 TNRC18P2-201ENST00000417666 2714 ntBASIC14.19□□□□□ -0.14
RNF44Q7L0R7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF44Q7L0R7 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms