Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 AL023775.1-201ENST00000454907 1746 ntBASIC13.03□□□□□ -0.32
C11orf88Q6PI97 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 AL353705.2-201ENST00000428243 662 ntBASIC13.03□□□□□ -0.32
C11orf88Q6PI97 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 AC241585.1-201ENST00000433527 519 ntBASIC13.03□□□□□ -0.32
C11orf88Q6PI97 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.03□□□□□ -0.32
C11orf88Q6PI97 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 AC138761.1-201ENST00000584393 385 ntBASIC13.03□□□□□ -0.32
C11orf88Q6PI97 AC007967.4-201ENST00000614700 386 ntBASIC13.03□□□□□ -0.32
C11orf88Q6PI97 AL358472.5-202ENST00000641448 1267 ntBASIC13.03□□□□□ -0.32
C11orf88Q6PI97 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 FOXO1B-201ENST00000504678 1527 ntBASIC13.03□□□□□ -0.32
C11orf88Q6PI97 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC13.03□□□□□ -0.32
C11orf88Q6PI97 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC13.02□□□□□ -0.32
C11orf88Q6PI97 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
C11orf88Q6PI97 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.02□□□□□ -0.32
C11orf88Q6PI97 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
C11orf88Q6PI97 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
C11orf88Q6PI97 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
C11orf88Q6PI97 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
C11orf88Q6PI97 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
C11orf88Q6PI97 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
C11orf88Q6PI97 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
C11orf88Q6PI97 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
C11orf88Q6PI97 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
C11orf88Q6PI97 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
C11orf88Q6PI97 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.02□□□□□ -0.32
C11orf88Q6PI97 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
C11orf88Q6PI97 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC13.02□□□□□ -0.32
C11orf88Q6PI97 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
C11orf88Q6PI97 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms