Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 FLJ16779-201ENST00000612722 7638 ntBASIC15.57■□□□□ 0.08
RNF43Q68DV7 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 MIR663B-201ENST00000408361 115 ntBASIC15.57■□□□□ 0.08
RNF43Q68DV7 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 AC092135.3-201ENST00000624151 1846 ntBASIC15.57■□□□□ 0.08
RNF43Q68DV7 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.56■□□□□ 0.08
RNF43Q68DV7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF43Q68DV7 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF43Q68DV7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF43Q68DV7 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF43Q68DV7 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF43Q68DV7 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF43Q68DV7 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF43Q68DV7 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF43Q68DV7 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF43Q68DV7 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF43Q68DV7 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
RNF43Q68DV7 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.56■□□□□ 0.08
RNF43Q68DV7 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.56■□□□□ 0.08
RNF43Q68DV7 Z93015.1-201ENST00000451718 390 ntBASIC15.56■□□□□ 0.08
RNF43Q68DV7 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF43Q68DV7 AP003171.2-201ENST00000528208 925 ntBASIC15.56■□□□□ 0.08
RNF43Q68DV7 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF43Q68DV7 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
RNF43Q68DV7 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.56■□□□□ 0.08
RNF43Q68DV7 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RNF43Q68DV7 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.56■□□□□ 0.08
RNF43Q68DV7 AC015967.2-201ENST00000624092 234 ntBASIC15.56■□□□□ 0.08
RNF43Q68DV7 AC006435.4-201ENST00000625037 234 ntBASIC15.56■□□□□ 0.08
RNF43Q68DV7 AL356737.1-201ENST00000634391 234 ntBASIC15.56■□□□□ 0.08
RNF43Q68DV7 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RNF43Q68DV7 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF43Q68DV7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF43Q68DV7 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RNF43Q68DV7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF43Q68DV7 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF43Q68DV7 ACE3P-201ENST00000423435 1973 ntBASIC15.56■□□□□ 0.08
RNF43Q68DV7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF43Q68DV7 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
RNF43Q68DV7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RNF43Q68DV7 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF43Q68DV7 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF43Q68DV7 AL161772.1-201ENST00000610494 4412 ntBASIC15.56■□□□□ 0.08
RNF43Q68DV7 MYO15B-237ENST00000642007 4893 ntBASIC15.55■□□□□ 0.08
RNF43Q68DV7 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF43Q68DV7 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF43Q68DV7 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF43Q68DV7 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF43Q68DV7 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF43Q68DV7 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF43Q68DV7 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RNF43Q68DV7 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF43Q68DV7 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF43Q68DV7 REXO1L2P-201ENST00000425429 2069 ntBASIC15.55■□□□□ 0.08
RNF43Q68DV7 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF43Q68DV7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF43Q68DV7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RNF43Q68DV7 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF43Q68DV7 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms