Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 AP001002.3-201ENST00000623482 206 ntBASIC17.68■□□□□ 0.42
RNF20Q5VTR2 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF20Q5VTR2 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 AC139712.1-201ENST00000378256 1875 ntBASIC17.67■□□□□ 0.42
RNF20Q5VTR2 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 PUDPP3-201ENST00000445368 636 ntBASIC17.67■□□□□ 0.42
RNF20Q5VTR2 KRT17P7-201ENST00000451704 1104 ntBASIC17.67■□□□□ 0.42
RNF20Q5VTR2 AL590640.2-201ENST00000457038 527 ntBASIC17.67■□□□□ 0.42
RNF20Q5VTR2 AC007551.1-201ENST00000457394 519 ntBASIC17.67■□□□□ 0.42
RNF20Q5VTR2 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 AC103988.2-201ENST00000561804 725 ntBASIC17.67■□□□□ 0.42
RNF20Q5VTR2 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 OR10B1P-201ENST00000601666 907 ntBASIC17.67■□□□□ 0.42
RNF20Q5VTR2 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
RNF20Q5VTR2 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 CNN2P8-201ENST00000421872 913 ntBASIC17.66■□□□□ 0.42
RNF20Q5VTR2 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 FAM197Y7-201ENST00000432892 766 ntBASIC17.66■□□□□ 0.42
RNF20Q5VTR2 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 AC138951.2-201ENST00000623455 1161 ntBASIC17.66■□□□□ 0.42
RNF20Q5VTR2 AC006453.4-201ENST00000636949 1252 ntBASIC17.66■□□□□ 0.42
RNF20Q5VTR2 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 NIN-202ENST00000324330 4364 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms