Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 AC103592.1-201ENST00000394513 664 ntBASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 CISD2-202ENST00000503643 808 ntTSL 2 BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 AC023968.2-201ENST00000560593 1049 ntBASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 HPD-204ENST00000543163 1709 ntTSL 5 BASIC21.6■■□□□ 1.05
CDC42BPAQ5VT25 ZNF436-AS1-201ENST00000335648 2547 ntBASIC21.59■■□□□ 1.05
CDC42BPAQ5VT25 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CDC42BPAQ5VT25 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42BPAQ5VT25 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42BPAQ5VT25 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC21.59■■□□□ 1.05
CDC42BPAQ5VT25 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC21.59■■□□□ 1.05
CDC42BPAQ5VT25 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CDC42BPAQ5VT25 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC21.59■■□□□ 1.05
CDC42BPAQ5VT25 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC21.59■■□□□ 1.05
CDC42BPAQ5VT25 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42BPAQ5VT25 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42BPAQ5VT25 AC015909.5-201ENST00000624336 2266 ntBASIC21.59■■□□□ 1.05
CDC42BPAQ5VT25 MIR566-201ENST00000385187 94 ntBASIC21.59■■□□□ 1.05
CDC42BPAQ5VT25 AL359091.4-201ENST00000610052 409 ntBASIC21.59■■□□□ 1.05
CDC42BPAQ5VT25 AC090505.1-201ENST00000430515 1834 ntBASIC21.59■■□□□ 1.05
CDC42BPAQ5VT25 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42BPAQ5VT25 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42BPAQ5VT25 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC21.59■■□□□ 1.05
CDC42BPAQ5VT25 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC21.59■■□□□ 1.05
CDC42BPAQ5VT25 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CDC42BPAQ5VT25 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC21.59■■□□□ 1.05
CDC42BPAQ5VT25 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDC42BPAQ5VT25 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDC42BPAQ5VT25 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC21.58■■□□□ 1.05
CDC42BPAQ5VT25 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDC42BPAQ5VT25 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDC42BPAQ5VT25 MIR1301-201ENST00000408518 82 ntBASIC21.58■■□□□ 1.05
CDC42BPAQ5VT25 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC21.58■■□□□ 1.05
CDC42BPAQ5VT25 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC21.58■■□□□ 1.05
CDC42BPAQ5VT25 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC21.58■■□□□ 1.05
CDC42BPAQ5VT25 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC21.58■■□□□ 1.05
CDC42BPAQ5VT25 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC21.58■■□□□ 1.05
CDC42BPAQ5VT25 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDC42BPAQ5VT25 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC21.58■■□□□ 1.05
CDC42BPAQ5VT25 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDC42BPAQ5VT25 PAUPAR-201ENST00000630360 2965 ntBASIC21.58■■□□□ 1.05
CDC42BPAQ5VT25 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDC42BPAQ5VT25 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC21.58■■□□□ 1.05
CDC42BPAQ5VT25 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC21.58■■□□□ 1.05
CDC42BPAQ5VT25 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC21.58■■□□□ 1.04
CDC42BPAQ5VT25 WARS-203ENST00000358655 2466 ntTSL 2 BASIC21.58■■□□□ 1.04
CDC42BPAQ5VT25 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDC42BPAQ5VT25 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
CDC42BPAQ5VT25 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDC42BPAQ5VT25 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CDC42BPAQ5VT25 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDC42BPAQ5VT25 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDC42BPAQ5VT25 LINP1-201ENST00000417112 917 ntTSL 2 BASIC21.58■■□□□ 1.04
CDC42BPAQ5VT25 AL929302.1-201ENST00000426556 871 ntBASIC21.58■■□□□ 1.04
CDC42BPAQ5VT25 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC21.58■■□□□ 1.04
CDC42BPAQ5VT25 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC21.58■■□□□ 1.04
CDC42BPAQ5VT25 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC21.58■■□□□ 1.04
CDC42BPAQ5VT25 AL139339.2-201ENST00000608063 657 ntBASIC21.58■■□□□ 1.04
CDC42BPAQ5VT25 COQ4-204ENST00000608951 781 ntTSL 2 BASIC21.58■■□□□ 1.04
CDC42BPAQ5VT25 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 RN7SL832P-201ENST00000607781 1756 ntBASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 HNRNPA1P2-207ENST00000432375 960 ntBASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 RN7SKP155-201ENST00000516031 288 ntBASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 MIR4265-201ENST00000582152 99 ntBASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms