Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TFF3Q07654 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.99□□□□□ -0.33
TFF3Q07654 RN7SL258P-201ENST00000478664 300 ntBASIC12.99□□□□□ -0.33
TFF3Q07654 ALG3P1-201ENST00000508806 1114 ntBASIC12.99□□□□□ -0.33
TFF3Q07654 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.99□□□□□ -0.33
TFF3Q07654 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC12.99□□□□□ -0.33
TFF3Q07654 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.99□□□□□ -0.33
TFF3Q07654 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.99□□□□□ -0.33
TFF3Q07654 AC005962.1-201ENST00000584100 773 ntBASIC12.99□□□□□ -0.33
TFF3Q07654 AC009884.2-201ENST00000603110 324 ntBASIC12.99□□□□□ -0.33
TFF3Q07654 MIR6720-201ENST00000611664 98 ntBASIC12.99□□□□□ -0.33
TFF3Q07654 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TFF3Q07654 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TFF3Q07654 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
TFF3Q07654 AL805961.1-201ENST00000642026 753 ntBASIC12.99□□□□□ -0.33
TFF3Q07654 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TFF3Q07654 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TFF3Q07654 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.99□□□□□ -0.33
TFF3Q07654 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TFF3Q07654 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TFF3Q07654 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TFF3Q07654 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TFF3Q07654 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
TFF3Q07654 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TFF3Q07654 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TFF3Q07654 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.99□□□□□ -0.33
TFF3Q07654 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.99□□□□□ -0.33
TFF3Q07654 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TFF3Q07654 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TFF3Q07654 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TFF3Q07654 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TFF3Q07654 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TFF3Q07654 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TFF3Q07654 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TFF3Q07654 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
TFF3Q07654 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.99□□□□□ -0.33
TFF3Q07654 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TFF3Q07654 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TFF3Q07654 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TFF3Q07654 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.99□□□□□ -0.33
TFF3Q07654 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TFF3Q07654 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
TFF3Q07654 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.98□□□□□ -0.33
TFF3Q07654 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
TFF3Q07654 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 KRT8P21-201ENST00000430398 1491 ntBASIC12.98□□□□□ -0.33
TFF3Q07654 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.98□□□□□ -0.33
TFF3Q07654 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.98□□□□□ -0.33
TFF3Q07654 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.98□□□□□ -0.33
TFF3Q07654 AL365209.1-201ENST00000624418 6473 ntBASIC12.98□□□□□ -0.33
TFF3Q07654 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.98□□□□□ -0.33
TFF3Q07654 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.98□□□□□ -0.33
TFF3Q07654 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC12.98□□□□□ -0.33
TFF3Q07654 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC12.98□□□□□ -0.33
TFF3Q07654 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
TFF3Q07654 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC12.98□□□□□ -0.33
TFF3Q07654 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.98□□□□□ -0.33
TFF3Q07654 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC12.98□□□□□ -0.33
TFF3Q07654 YRDCP1-201ENST00000621419 643 ntBASIC12.98□□□□□ -0.33
TFF3Q07654 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.98□□□□□ -0.33
TFF3Q07654 AC138035.3-201ENST00000622706 2791 ntBASIC12.98□□□□□ -0.33
TFF3Q07654 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
TFF3Q07654 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 AL161772.1-201ENST00000610494 4412 ntBASIC12.98□□□□□ -0.33
TFF3Q07654 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TFF3Q07654 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TFF3Q07654 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.98□□□□□ -0.33
TFF3Q07654 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TFF3Q07654 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.98□□□□□ -0.33
TFF3Q07654 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
TFF3Q07654 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TFF3Q07654 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TFF3Q07654 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TFF3Q07654 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TFF3Q07654 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms